Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q47SH9 (Q47SH9_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Tfu_0550 EMBL AAZ54588.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ54588.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length509 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AAZ54588.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

phosphoric diester hydrolase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47SH9 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 7348A6F84870AE77

FASTA50954,697
        10         20         30         40         50         60 
MLPRLPDGPG GRSGSLQPWR NGRLQNDEKE RELRALPVAA RLYVGLVALG AATAILLGVF 

        70         80         90        100        110        120 
LGPITEVDLG TLLLLAILFV IAESIATMVD SGKTGISPAS AASLAAVVLV GPVGAAIVGI 

       130        140        150        160        170        180 
ASGLVIRRQN LVKRLFNGAQ FVIAGYASGT VFQLLGGRMG VPEPEMFPWI LLPFTGAVLT 

       190        200        210        220        230        240 
FSLCNTLLMA GLMWSLGELR LKRPRHMRWR PLATLELSSI GYAMLGLFIA AIWGAVGPFA 

       250        260        270        280        290        300 
VLLVLLPLFI ARWAFDQYVF QQRAHEATLA TLCQAVETKD YYTRGHCMRV AKAAAMIAEE 

       310        320        330        340        350        360 
LGMSAERVQT MRYAGMLHDI GKLGVPTKIL QKAGKLTEEE YAAIQLHPMR GYEIVREIDF 

       370        380        390        400        410        420 
LDEALAGILH HHERIDGGGY PKGLAGEDIP EAARLVSVAD VFDCLTSTRS YRKAWSTEAA 

       430        440        450        460        470        480 
IAELRRCAGT QFDPRMVEAL VRAVEREGWE VPDLVEPVED ACEPCTAQPV GASEAAPETV 

       490        500 
PTGAAQTAAD GDTQTDTNLT VGVVEETTG 

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ54588.1.
RefSeqYP_288611.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47SH9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_0550.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ54588; AAZ54588; Tfu_0550.
GeneID3580425.
KEGGtfu:Tfu_0550.
PATRIC23901528. VBITheFus33945_0569.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2206.
HOGENOMHOG000020213.
OMAPEYGHEM.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK570090.

Enzyme and pathway databases

BioCycTFUS269800:GI42-563-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR006675. Uncharacterised_HDIG.
[Graphical view]
PfamPF01966. HD. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00277. HDIG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47SH9_THEFY
AccessionPrimary (citable) accession number: Q47SH9
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)