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Q47SH8 (Q47SH8_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tfu_0551 EMBL AAZ54589.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ54589.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q47SH8 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 9C9DAED32FAB50A4

FASTA44047,409
        10         20         30         40         50         60 
MMNSAPTVAS HIPQRARHGR QWRAVGWTRP LLIGAALVST AVSLLWTAVS GFEQPRVALA 

        70         80         90        100        110        120 
FGVLVALGEF ARITLPGGRE AAPIATASAM SYAFLFTIIG DPVSLPSPQV VAVVAVGMGL 

       130        140        150        160        170        180 
GELPHILVGR HPQWGDLARR FLNIAVTTLL FRPLIGHIDL DGPLWWLSLL LMAAIVVVVW 

       190        200        210        220        230        240 
LADSVAAAAI RADRMRTRFG VTLRDEMRAQ VAIGMAVGAS AILMALSVHV MGLTTLLVFT 

       250        260        270        280        290        300 
APLLVTQVAF RRFAQIRRTY LQTVRALSRV TEVGGYVEAG HSRRVSRLAQ GIGRELGMSE 

       310        320        330        340        350        360 
STLLELEYAA LMHDIGQLSL RDPIPSGATV LASPREQRSI AELGAAIIRE TGVLDGVAEL 

       370        380        390        400        410        420 
VRRQCEPYLG DGEAGPPPLG SRIIKVANAF DDLVGGSTDQ ERVDAVLQRL RMDTGHEYDP 

       430        440 
VVVEALATVL QRPDFDWRSG 

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ54589.1.
RefSeqYP_288612.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47SH8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_0551.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ54589; AAZ54589; Tfu_0551.
GeneID3580426.
KEGGtfu:Tfu_0551.
PATRIC23901530. VBITheFus33945_0570.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2206.
HOGENOMHOG000020224.
OMALEYAALM.
OrthoDBEOG6R87DZ.
ProtClustDBCLSK570091.

Enzyme and pathway databases

BioCycTFUS269800:GI42-564-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamPF01966. HD. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47SH8_THEFY
AccessionPrimary (citable) accession number: Q47SH8
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 16, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)