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Q47SE7

- GLGB_THEFY

UniProt

Q47SE7 - GLGB_THEFY

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Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, Tfu_0582
Organism
Thermobifida fusca (strain YX)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei427 – 4271Nucleophile By similarity
Active sitei480 – 4801Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciTFUS269800:GI42-595-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Tfu_0582
OrganismiThermobifida fusca (strain YX)
Taxonomic identifieri269800 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida
ProteomesiUP000000434: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7497491,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_0000260710Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi269800.Tfu_0582.

Structurei

3D structure databases

ProteinModelPortaliQ47SE7.
SMRiQ47SE7. Positions 141-747.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiVACVFNF.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q47SE7-1 [UniParc]FASTAAdd to Basket

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MTARPAVRQP AGLPCPQPCN RYGYPMTNAL LAEIDALVAG THHNPHALLG    50
AHPGPEGVWV RALRPLARSV HVLLANGSRV ELPHLHKGVF AGVVPGAEVP 100
DYRLVVRYDD GTELTVDDPY RHLPTLGELD IHLIQEGRHE ELWRVLGAHT 150
KRFPSVLGDT EGTAFTVWAP NARGVRVIGD FNHWDGTGHP MRSLGSCGVW 200
ELFIPGVGDG TRYKYQVLGA DGVWREKADP VAFATQAPPE TASVVFTSRY 250
TWQDDEWLTQ RAAADLHRKP MSIYEVHLGS WRPGLSYREL ADQLVDYVRE 300
LGFTHVEFLP VAEHPFGGSW GYQVTSYYAP TARFGSPDDF RYLVDRLHQA 350
GIGVFLDWVP AHFPKDDWAL SRFDGTALYE HPDPRRGIHP DWDTLIFNYG 400
RTEVRNFLVA NALFWLEEFH IDGLRVDAVA SMLYLDYSRE SGQWEPNAYG 450
GRENLDAIDF LRELNATAYR RNPGIAMIAE ESTAWPGVTR STDTGGLGFG 500
FKWNMGWMHD TLSYLQHDPV HRQYHHNEVT FSMVYAYSEN YVLPLSHDEV 550
VHGKRSLLYK MPGNEWQRCA NLRALLAYMW AHPGKQLLFM GNEIAQGDEW 600
SHDAGVQWWL LRYPHHAGMR RLVADLNRLY RNTRALWSQD TVPEGFTWLD 650
GGDASGNTLS FLRWGDDGSV LACLVNFSGR PHPERRVGLP YAGRWREILN 700
TDAVLYGGSG VSQPGIIEAS EETPWQGQPA SALVTYPPLG VSWLVFDGT 749
Length:749
Mass (Da):84,375
Last modified:September 13, 2005 - v1
Checksum:iECE7BC0418FFE633
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000088 Genomic DNA. Translation: AAZ54620.1.
RefSeqiWP_011291029.1. NC_007333.1.
YP_288643.1. NC_007333.1.

Genome annotation databases

EnsemblBacteriaiAAZ54620; AAZ54620; Tfu_0582.
GeneIDi3580156.
KEGGitfu:Tfu_0582.
PATRICi23901596. VBITheFus33945_0603.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000088 Genomic DNA. Translation: AAZ54620.1 .
RefSeqi WP_011291029.1. NC_007333.1.
YP_288643.1. NC_007333.1.

3D structure databases

ProteinModelPortali Q47SE7.
SMRi Q47SE7. Positions 141-747.
ModBasei Search...

Protein-protein interaction databases

STRINGi 269800.Tfu_0582.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ54620 ; AAZ54620 ; Tfu_0582 .
GeneIDi 3580156.
KEGGi tfu:Tfu_0582.
PATRICi 23901596. VBITheFus33945_0603.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi VACVFNF.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci TFUS269800:GI42-595-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YX.

Entry informationi

Entry nameiGLGB_THEFY
AccessioniPrimary (citable) accession number: Q47SE7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: September 13, 2005
Last modified: September 3, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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