Q47SA9 (Q47SA9_THEFY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cellobiohydrolase. Glycosyl Hydrolase family 6 EMBL AAZ54658.1
EC=3.2.1.91 EMBL AAZ54658.1

Gene names

Ordered Locus Names:

Tfu_0620

Organism

Thermobifida fusca (strain YX) [Complete proteome] [HAMAP]

Taxonomic identifier

269800 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Nocardiopsaceae › Thermobifida

Protein attributes

Sequence length	596 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AAZ54658.1
Molecular function	Glycosidase EMBL AAZ54658.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellulose catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cellulose 1,4-beta-cellobiosidase activity Inferred from electronic annotation. Source: EC polysaccharide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 39	39	Potential EMBL AAZ54658.1
	Chain	40 – 596	557	Potential EMBL AAZ54658.1		PRO_5000099379

Sequences

	Sequence		Length	Mass (Da)
	Q47SA9 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: B0FA5277FE7721E0	FASTA	596	63,548
	10 20 30 40 50 60 MSKVRATNRR SWMRRGLAAA SGLALGASMV AFAAPANAAG CSVDYTVNSW GTGFTANVTI 70 80 90 100 110 120 TNLGSAINGW TLEWDFPGNQ QVTNLWNGTY TQSGQHVSVS NAPYNASIPA NGTVEFGFNG 130 140 150 160 170 180 SYSGSNDIPS SFKLNGVTCD GSDDPDPEPS PSPSPSPSPT DPDEPGGPTN PPTNPGEKVD 190 200 210 220 230 240 NPFEGAKLYV NPVWSAKAAA EPGGSAVANE STAVWLDRIG AIEGNDSPTT GSMGLRDHLE 250 260 270 280 290 300 EAVRQSGGDP LTIQVVIYNL PGRDCAALAS NGELGPDELD RYKSEYIDPI ADIMWDFADY 310 320 330 340 350 360 ENLRIVAIIE IDSLPNLVTN VGGNGGTELC AYMKQNGGYV NGVGYALRKL GEIPNVYNYI 370 380 390 400 410 420 DAAHHGWIGW DSNFGPSVDI FYEAANASGS TVDYVHGFIS NTANYSATVE PYLDVNGTVN 430 440 450 460 470 480 GQLIRQSKWV DWNQYVDELS FVQDLRQALI AKGFRSDIGM LIDTSRNGWG GPNRPTGPSS 490 500 510 520 530 540 STDLNTYVDE SRIDRRIHPG NWCNQAGAGL GERPTVNPAP GVDAYVWVKP PGESDGASEE 550 560 570 580 590 IPNDEGKGFD RMCDPTYQGN ARNGNNPSGA LPNAPISGHW FSAQFRELLA NAYPPL

References

[1]

"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX." Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N. J. Bacteriol. 189:2477-2486(2007) [PubMed: 17209016] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000088 Genomic DNA. Translation: AAZ54658.1.
RefSeq	YP_288681.1. NC_007333.1.
3D structure databases
ProteinModelPortal	Q47SA9.
SMR	Q47SA9. Positions 37-141.
ModBase	Search...
Protein-protein interaction databases
STRING	Q47SA9.
Protein family/group databases
CAZy	CBM2. Carbohydrate-Binding Module Family 2. GH6. Glycoside Hydrolase Family 6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3580649.
GenomeReviews	Gene locus Tfu_0620 in contig CP000088_GR.
KEGG	tfu:Tfu_0620.
NMPDR	fig|269800.4.peg.616.
PATRIC	23901674. VBITheFus33945_0642.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5297.
HOGENOM	HBG756137.
OMA	NAPISGH.
Enzyme and pathway databases
BioCyc	TFUS269800:TFU_0620-MONOMER.
Family and domain databases
InterPro	IPR016288. Beta_cellobiohydrolase. IPR008965. Carb-bd_dom. IPR012291. CBD_carb-bd_dom. IPR001919. Cellulose-bd_dom_fam2_bac. IPR001524. Glyco_hydro_6_CS. IPR006311. TAT_signal. [Graphical view]
Gene3D	G3DSA:2.60.40.290. CBD_carb_bd. 1 hit. G3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
KO	K01225.
Pfam	PF00553. CBM_2. 1 hit. PF01341. Glyco_hydro_6. 1 hit. [Graphical view]
PIRSF	PIRSF001100. Beta_cellobiohydrolase. 1 hit.
PRINTS	PR00733. GLHYDRLASE6.
SMART	SM00637. CBD_II. 1 hit. [Graphical view]
SUPFAM	SSF49384. Cellul_bind. 1 hit. SSF51989. Glyco_hydro_6. 1 hit.
PROSITE	PS51173. CBM2. 1 hit. PS00655. GLYCOSYL_HYDROL_F6_1. 1 hit. PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q47SA9_THEFY

Accession

Primary (citable) accession number: Q47SA9

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)