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Q47S39 (Q47S39_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL AAZ54728.1
Gene names
Ordered Locus Names:Tfu_0690 EMBL AAZ54728.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ54728.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q47S39 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: EC31547F8DEDC3D1

FASTA44847,402
        10         20         30         40         50         60 
MASEHADLPQ ERRLVTEIPG PRSRALQERR TAAVAQGVGS SLPVYVVRAS GGIVEDVDGN 

        70         80         90        100        110        120 
RLIDFGSGIA VTNVGNANPR VVARASEQLA RFTHTCFMIN PYEGYVDVCE ALNRITPGDH 

       130        140        150        160        170        180 
EKRSILVNSG AEAVENAVKI ARHATGRQAV VVFDHAYHGR TNLTMALTAR NMPYKQGFGP 

       190        200        210        220        230        240 
FAGEVYRMPM AYPFRWPTGP DNCGPEAAAQ AIDLITTQIG PENVAAVLIE PIQGEGGFIV 

       250        260        270        280        290        300 
PGEGFLPALV EFCRKHGIVF IADEIQTGFA RTGRLFACEH EGIVPDLITT AKGIAGGLPL 

       310        320        330        340        350        360 
AAVTGRAELM DAVHGGGLGG TYGGNPVACA AALAALETIE QDNLVERARA IGDVLLSRLR 

       370        380        390        400        410        420 
ALAERYDIIG DVRGRGAMVA MELVAGAGDK TPNPEALASV VKYCHAKGLI LLTAGTYGNV 

       430        440 
IRLLPPLVIS DALLDEGLTI IEEAFAQL 

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ54728.1.
RefSeqYP_288751.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47S39.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_0690.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ54728; AAZ54728; Tfu_0690.
GeneID3580533.
KEGGtfu:Tfu_0690.
PATRIC23901824. VBITheFus33945_0714.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMARMPMAYP.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycTFUS269800:GI42-706-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47S39_THEFY
AccessionPrimary (citable) accession number: Q47S39
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)