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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Tfu_0690

Organism
Thermobifida fusca (strain YX)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciTFUS269800:GI42-706-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Tfu_0690Imported
OrganismiThermobifida fusca (strain YX)Imported
Taxonomic identifieri269800 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesNocardiopsaceaeThermobifida
ProteomesiUP000000434 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269800.Tfu_0690.

Structurei

3D structure databases

ProteinModelPortaliQ47S39.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47S39-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEHADLPQ ERRLVTEIPG PRSRALQERR TAAVAQGVGS SLPVYVVRAS
60 70 80 90 100
GGIVEDVDGN RLIDFGSGIA VTNVGNANPR VVARASEQLA RFTHTCFMIN
110 120 130 140 150
PYEGYVDVCE ALNRITPGDH EKRSILVNSG AEAVENAVKI ARHATGRQAV
160 170 180 190 200
VVFDHAYHGR TNLTMALTAR NMPYKQGFGP FAGEVYRMPM AYPFRWPTGP
210 220 230 240 250
DNCGPEAAAQ AIDLITTQIG PENVAAVLIE PIQGEGGFIV PGEGFLPALV
260 270 280 290 300
EFCRKHGIVF IADEIQTGFA RTGRLFACEH EGIVPDLITT AKGIAGGLPL
310 320 330 340 350
AAVTGRAELM DAVHGGGLGG TYGGNPVACA AALAALETIE QDNLVERARA
360 370 380 390 400
IGDVLLSRLR ALAERYDIIG DVRGRGAMVA MELVAGAGDK TPNPEALASV
410 420 430 440
VKYCHAKGLI LLTAGTYGNV IRLLPPLVIS DALLDEGLTI IEEAFAQL
Length:448
Mass (Da):47,402
Last modified:September 13, 2005 - v1
Checksum:iEC31547F8DEDC3D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000088 Genomic DNA. Translation: AAZ54728.1.
RefSeqiWP_011291137.1. NC_007333.1.
YP_288751.1. NC_007333.1.

Genome annotation databases

EnsemblBacteriaiAAZ54728; AAZ54728; Tfu_0690.
KEGGitfu:Tfu_0690.
PATRICi23901824. VBITheFus33945_0714.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000088 Genomic DNA. Translation: AAZ54728.1.
RefSeqiWP_011291137.1. NC_007333.1.
YP_288751.1. NC_007333.1.

3D structure databases

ProteinModelPortaliQ47S39.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269800.Tfu_0690.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ54728; AAZ54728; Tfu_0690.
KEGGitfu:Tfu_0690.
PATRICi23901824. VBITheFus33945_0714.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciTFUS269800:GI42-706-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YXImported.

Entry informationi

Entry nameiQ47S39_THEFY
AccessioniPrimary (citable) accession number: Q47S39
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 24, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.