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Q47R05 (Q47R05_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Endoglucanase. Glycosyl Hydrolase family 6 EMBL AAZ55112.1
EC=3.2.1.4 EMBL AAZ55112.1
Gene names
Ordered Locus Names:Tfu_1074
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP]
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Nocardiopsaceae › Thermobifida

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AAZ55112.1
   Molecular functionGlycosidase EMBL AAZ55112.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellulose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncellulase activity

Inferred from electronic annotation. Source: EC

polysaccharide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL AAZ55112.1
Chain33 – 441409 Potential EMBL AAZ55112.1
PRO_5000099422

Sequences

Sequence LengthMass (Da)Tools
Q47R05 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 87218E4537092AE5

FASTA44145,844
        10         20         30         40         50         60 
MSPRPLRALL GAAAAALVSA AALAFPSQAA ANDSPFYVNP NMSSAEWVRN NPNDPRTPVI 

        70         80         90        100        110        120 
RDRIASVPQG TWFAHHNPGQ ITGQVDALMS AAQAAGKIPI LVVYNAPGRD CGNHSSGGAP 

       130        140        150        160        170        180 
SHSAYRSWID EFAAGLKNRP AYIIVEPDLI SLMSSCMQHV QQEVLETMAY AGKALKAGSS 

       190        200        210        220        230        240 
QARIYFDAGH SAWHSPAQMA SWLQQADISN SAHGIATNTS NYRWTADEVA YAKAVLSAIG 

       250        260        270        280        290        300 
NPSLRAVIDT SRNGNGPAGN EWCDPSGRAI GTPSTTNTGD PMIDAFLWIK LPGEADGCIA 

       310        320        330        340        350        360 
GAGQFVPQAA YEMAIAAGGT NPNPNPNPTP TPTPTPTPPP GSSGACTATY TIANEWNDGF 

       370        380        390        400        410        420 
QATVTVTANQ NITGWTVTWT FTDGQTITNA WNADVSTSGS SVTARNVGHN GTLSQGASTE 

       430        440 
FGFVGSKGNS NSVPTLTCAA S

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed: 17209016] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000088 Genomic DNA. Translation: AAZ55112.1.
RefSeqYP_289135.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47R05.
SMRQ47R05. Positions 32-317.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ47R05.

Protein family/group databases

CAZyCBM2. Carbohydrate-Binding Module Family 2.
GH6. Glycoside Hydrolase Family 6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3580066.
GenomeReviewsGene locus Tfu_1074 in contig CP000088_GR.
KEGGtfu:Tfu_1074.
NMPDRfig|269800.4.peg.322.
PATRIC23902638. VBITheFus33945_1119.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5297.
HOGENOMHBG485256.
OMADGCIAGA.
ProtClustDBCLSK2526234.

Enzyme and pathway databases

BioCycTFUS269800:TFU_1074-MONOMER.

Family and domain databases

InterProIPR016288. Beta_cellobiohydrolase.
IPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR018366. CBM2_CS.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR001524. Glyco_hydro_6_CS.
IPR006311. TAT_signal.
[Graphical view]
Gene3DG3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
KOK01179.
PfamPF00553. CBM_2. 1 hit.
PF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PRINTSPR00733. GLHYDRLASE6.
SMARTSM00637. CBD_II. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 1 hit.
SSF51989. Glyco_hydro_6. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
PS00561. CBM2_A. 1 hit.
PS00655. GLYCOSYL_HYDROL_F6_1. 1 hit.
PS00656. GLYCOSYL_HYDROL_F6_2. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47R05_THEFY
AccessionPrimary (citable) accession number: Q47R05
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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