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Q47QX5 (Q47QX5_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.4.1.129 EMBL AAZ55142.1
Gene names
Ordered Locus Names:Tfu_1104
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ55142.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length653 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q47QX5 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 73C454DC120D603F

FASTA65370,775
        10         20         30         40         50         60 
MSTPRDRSPK DPRRPAAAAR SRHGHRPRSA QPARRSPRPS AEAARRRAVP RNRTGASAGR 

        70         80         90        100        110        120 
RPHPAPSIRS PLRRRFRRGA IQPRIRVMGA ILGTVLLLFA ARLVQIQGFN ADDYAEAAAN 

       130        140        150        160        170        180 
LRLTTIEIPT VRGDITDMAG RPFAMSVEVR TVFLDPAEVR DDQREEIVQE LSRRFDLPPE 

       190        200        210        220        230        240 
EIVAKLNARV DGRPSRYEVV QRGVPIEEWK EIRELGFHGV SAERDYKRVY PEETGAANLV 

       250        260        270        280        290        300 
GFVGLDGHGL EGLEAVLDST LAGEAGQQQV EVGSDGTQIP MAGGLIREPV PGRTVRLTLD 

       310        320        330        340        350        360 
LDLQWYAQQA LNRRVEELDA EAGSVVVMTR DGQIRAMANY PTYDPNNFSA VSAEQRRNGA 

       370        380        390        400        410        420 
VADAFEPGST AKVITVAAAL EEGLVTPDTV FTVPSSIRRY DQVFRDANPH PTQRLTVNGI 

       430        440        450        460        470        480 
MATSSNVGAI QIGEKVGAEK MYEYLRRFGV GQPTGLDLPG ENTGILTAPE HWSGTDLPSV 

       490        500        510        520        530        540 
SFGHSVSVNA VQLASVYATI ANDGVRVAPT LIAGMEDADG EFEAAPDPES ERVISADTAA 

       550        560        570        580        590        600 
DLRLMLEAVT EETGTAPQAR VEGYRVGGKT GTANRINPET GKYQGGGYVS SFVGFAPADD 

       610        620        630        640        650 
PELVVSVVLH SPKGEYYGGE AATPVFTDVM SFALKTARIP PTQTERPPLR LME 

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References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ55142.1.
RefSeqYP_289165.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47QX5.
ModBaseSearch...

Protein-protein interaction databases

STRING269800.Tfu_1104.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ55142; AAZ55142; Tfu_1104.
GeneID3579286.
KEGGtfu:Tfu_1104.
PATRIC23902702. VBITheFus33945_1151.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0768.
HOGENOMHOG000049553.
KOK03587.
OMAYGHTFEA.
ProtClustDBCLSK2769170.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56519. PBP_dimer. 1 hit.
SSF56601. PBP_transp_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47QX5_THEFY
AccessionPrimary (citable) accession number: Q47QX5
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)