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Q47PI1

- Q47PI1_THEFY

UniProt

Q47PI1 - Q47PI1_THEFY

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Protein
Xylose isomerase
Gene
xylA, Tfu_1603
Organism
Thermobifida fusca (strain YX)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei55 – 551 By similarityUniRule annotation
Active sitei58 – 581 By similarityUniRule annotation
Metal bindingi182 – 1821Magnesium 1 By similarityUniRule annotation
Metal bindingi218 – 2181Magnesium 1 By similarityUniRule annotation
Metal bindingi218 – 2181Magnesium 2 By similarityUniRule annotation
Metal bindingi221 – 2211Magnesium 2 By similarityUniRule annotation
Metal bindingi246 – 2461Magnesium 1 By similarityUniRule annotation
Metal bindingi256 – 2561Magnesium 2 By similarityUniRule annotation
Metal bindingi258 – 2581Magnesium 2 By similarityUniRule annotation
Metal bindingi288 – 2881Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciTFUS269800:GI42-1607-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Tfu_1603Imported
OrganismiThermobifida fusca (strain YX)Imported
Taxonomic identifieri269800 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida
ProteomesiUP000000434: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi269800.Tfu_1603.

Structurei

3D structure databases

ProteinModelPortaliQ47PI1.
SMRiQ47PI1. Positions 3-385.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000022596.
KOiK01805.
OMAiFAHETMA.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47PI1-1 [UniParc]FASTAAdd to Basket

« Hide

MSNYQPTPED RFSFGLWTVG WRGHNTFGKA VRPQLDPVDV VWKLRELGAY    50
GITFHDDDLL PPDSTPAERD AIIKRFTRAL EESGMTVPMV TTDLFSHPVF 100
RDGGFTSNSR DVRRYALRKV MRNIDRAAEL GARTYVCWGG MDGAEYEPAK 150
NISAALDRLR EAFNILCEYV RSKGYNLRFA LEPKPNEPRG DILLPTIGHA 200
IAFINELDHP EMVGLNPEVG HEQMAGLNFT HGIAQALWHG KLFHIDLNGQ 250
RGIKYDQDLR FGAGDVRDAF FLVNLLESSG YDGPRHFDFK TPRTEDVDGV 300
WEAARNCMRN YLIFKEKAEA FRADPEVREA MEAARVFELE QSTLAEGETL 350
DDLLAEDINL DEVAQRGYHF ERLDQLALDY LLGVR 385
Length:385
Mass (Da):43,772
Last modified:September 13, 2005 - v1
Checksum:i509DF48707462288
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000088 Genomic DNA. Translation: AAZ55638.1.
RefSeqiWP_011292029.1. NC_007333.1.
YP_289661.1. NC_007333.1.

Genome annotation databases

EnsemblBacteriaiAAZ55638; AAZ55638; Tfu_1603.
GeneIDi3581090.
KEGGitfu:Tfu_1603.
PATRICi23903804. VBITheFus33945_1734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000088 Genomic DNA. Translation: AAZ55638.1 .
RefSeqi WP_011292029.1. NC_007333.1.
YP_289661.1. NC_007333.1.

3D structure databases

ProteinModelPortali Q47PI1.
SMRi Q47PI1. Positions 3-385.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269800.Tfu_1603.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ55638 ; AAZ55638 ; Tfu_1603 .
GeneIDi 3581090.
KEGGi tfu:Tfu_1603.
PATRICi 23903804. VBITheFus33945_1734.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000022596.
KOi K01805.
OMAi FAHETMA.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci TFUS269800:GI42-1607-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YX.

Entry informationi

Entry nameiQ47PI1_THEFY
AccessioniPrimary (citable) accession number: Q47PI1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: September 3, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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