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Q47PI1 (Q47PI1_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length385 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site551 By similarity HAMAP-Rule MF_00455
Active site581 By similarity HAMAP-Rule MF_00455
Metal binding1821Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2181Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2181Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2211Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2461Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2561Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2581Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2881Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
Q47PI1 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 509DF48707462288

FASTA38543,772
        10         20         30         40         50         60 
MSNYQPTPED RFSFGLWTVG WRGHNTFGKA VRPQLDPVDV VWKLRELGAY GITFHDDDLL 

        70         80         90        100        110        120 
PPDSTPAERD AIIKRFTRAL EESGMTVPMV TTDLFSHPVF RDGGFTSNSR DVRRYALRKV 

       130        140        150        160        170        180 
MRNIDRAAEL GARTYVCWGG MDGAEYEPAK NISAALDRLR EAFNILCEYV RSKGYNLRFA 

       190        200        210        220        230        240 
LEPKPNEPRG DILLPTIGHA IAFINELDHP EMVGLNPEVG HEQMAGLNFT HGIAQALWHG 

       250        260        270        280        290        300 
KLFHIDLNGQ RGIKYDQDLR FGAGDVRDAF FLVNLLESSG YDGPRHFDFK TPRTEDVDGV 

       310        320        330        340        350        360 
WEAARNCMRN YLIFKEKAEA FRADPEVREA MEAARVFELE QSTLAEGETL DDLLAEDINL 

       370        380 
DEVAQRGYHF ERLDQLALDY LLGVR 

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ55638.1.
RefSeqYP_289661.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47PI1.
SMRQ47PI1. Positions 3-385.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_1603.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ55638; AAZ55638; Tfu_1603.
GeneID3581090.
KEGGtfu:Tfu_1603.
PATRIC23903804. VBITheFus33945_1734.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000022596.
KOK01805.
OMAFAHETMA.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycTFUS269800:GI42-1607-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02631. xylA_Arthro. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47PI1_THEFY
AccessionPrimary (citable) accession number: Q47PI1
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)