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Q47PI1

- Q47PI1_THEFY

UniProt

Q47PI1 - Q47PI1_THEFY

Protein

Xylose isomerase

Gene

xylA

Organism
Thermobifida fusca (strain YX)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei55 – 551UniRule annotation
    Active sitei58 – 581UniRule annotation
    Metal bindingi182 – 1821Magnesium 1UniRule annotation
    Metal bindingi218 – 2181Magnesium 1UniRule annotation
    Metal bindingi218 – 2181Magnesium 2UniRule annotation
    Metal bindingi221 – 2211Magnesium 2UniRule annotation
    Metal bindingi246 – 2461Magnesium 1UniRule annotation
    Metal bindingi256 – 2561Magnesium 2UniRule annotation
    Metal bindingi258 – 2581Magnesium 2UniRule annotation
    Metal bindingi288 – 2881Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciTFUS269800:GI42-1607-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Tfu_1603Imported
    OrganismiThermobifida fusca (strain YX)Imported
    Taxonomic identifieri269800 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida
    ProteomesiUP000000434: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi269800.Tfu_1603.

    Structurei

    3D structure databases

    ProteinModelPortaliQ47PI1.
    SMRiQ47PI1. Positions 3-385.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2115.
    HOGENOMiHOG000022596.
    KOiK01805.
    OMAiFAHETMA.
    OrthoDBiEOG62NX4R.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q47PI1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSNYQPTPED RFSFGLWTVG WRGHNTFGKA VRPQLDPVDV VWKLRELGAY    50
    GITFHDDDLL PPDSTPAERD AIIKRFTRAL EESGMTVPMV TTDLFSHPVF 100
    RDGGFTSNSR DVRRYALRKV MRNIDRAAEL GARTYVCWGG MDGAEYEPAK 150
    NISAALDRLR EAFNILCEYV RSKGYNLRFA LEPKPNEPRG DILLPTIGHA 200
    IAFINELDHP EMVGLNPEVG HEQMAGLNFT HGIAQALWHG KLFHIDLNGQ 250
    RGIKYDQDLR FGAGDVRDAF FLVNLLESSG YDGPRHFDFK TPRTEDVDGV 300
    WEAARNCMRN YLIFKEKAEA FRADPEVREA MEAARVFELE QSTLAEGETL 350
    DDLLAEDINL DEVAQRGYHF ERLDQLALDY LLGVR 385
    Length:385
    Mass (Da):43,772
    Last modified:September 13, 2005 - v1
    Checksum:i509DF48707462288
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000088 Genomic DNA. Translation: AAZ55638.1.
    RefSeqiWP_011292029.1. NC_007333.1.
    YP_289661.1. NC_007333.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ55638; AAZ55638; Tfu_1603.
    GeneIDi3581090.
    KEGGitfu:Tfu_1603.
    PATRICi23903804. VBITheFus33945_1734.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000088 Genomic DNA. Translation: AAZ55638.1 .
    RefSeqi WP_011292029.1. NC_007333.1.
    YP_289661.1. NC_007333.1.

    3D structure databases

    ProteinModelPortali Q47PI1.
    SMRi Q47PI1. Positions 3-385.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 269800.Tfu_1603.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ55638 ; AAZ55638 ; Tfu_1603 .
    GeneIDi 3581090.
    KEGGi tfu:Tfu_1603.
    PATRICi 23903804. VBITheFus33945_1734.

    Phylogenomic databases

    eggNOGi COG2115.
    HOGENOMi HOG000022596.
    KOi K01805.
    OMAi FAHETMA.
    OrthoDBi EOG62NX4R.

    Enzyme and pathway databases

    BioCyci TFUS269800:GI42-1607-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: YXImported.

    Entry informationi

    Entry nameiQ47PI1_THEFY
    AccessioniPrimary (citable) accession number: Q47PI1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3