Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q47NH7 (Q47NH7_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Cellulose 1,4-beta-cellobiosidase EMBL AAZ55992.1
EC=3.2.1.91 EMBL AAZ55992.1
Gene names
Ordered Locus Names:Tfu_1959
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP]
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Nocardiopsaceae › Thermobifida

Protein attributes

Sequence length984 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL AAZ55992.1
Chain36 – 984949 Potential EMBL AAZ55992.1
PRO_5000099506

Sequences

Sequence LengthMass (Da)Tools
Q47NH7 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 9F921C5756AC6153

FASTA984107,127
        10         20         30         40         50         60 
MRSLLSPRRW RTLASGALAA ALAAAVLSPG VAHAAVACSV DYDDSNDWGS GFVAEVKVTN 

        70         80         90        100        110        120 
EGSDPIQNWQ VGWTFPGNQQ ITNGWNGVFS QSGANVTVRY PDWNPNIAPG ATISFGFQGT 

       130        140        150        160        170        180 
YSGSNDAPTS FTVNGVTCSG SQPANLPPDV TLTSPANNST FLVNDPIELT AVASDPDGSI 

       190        200        210        220        230        240 
DRVEFAADNT VIGIDTTSPY SFTWTDAAAG SYSVTAIAYD DQGARTVSAP IAIRVLDRAA 

       250        260        270        280        290        300 
VIASPPTVRV PQGGTADFEV RLSNQPSGNV TVTVARTSGS SDLTVSSGSQ LQFTSSNWNQ 

       310        320        330        340        350        360 
PQKVTIASAD NGGNLAEAVF TVSAPGHDSA EVTVREIDPN TSSYDQAFLE QYEKIKDPAS 

       370        380        390        400        410        420 
GYFREFNGLL VPYHSVETMI VEAPDHGHQT TSEAFSYYLW LEAYYGRVTG DWKPLHDAWE 

       430        440        450        460        470        480 
SMETFIIPGT KDQPTNSAYN PNSPATYIPE QPNADGYPSP LMNNVPVGQD PLAQELSSTY 

       490        500        510        520        530        540 
GTNEIYGMHW LLDVDNVYGF GFCGDGTDDA PAYINTYQRG ARESVWETIP HPSCDDFTHG 

       550        560        570        580        590        600 
GPNGYLDLFT DDQNYAKQWR YTNAPDADAR AVQVMFWAHE WAKEQGKENE IAGLMDKASK 

       610        620        630        640        650        660 
MGDYLRYAMF DKYFKKIGNC VGATSCPGGQ GKDSAHYLLS WYYSWGGSLD TSSAWAWRIG 

       670        680        690        700        710        720 
SSSSHQGYQN VLAAYALSQV PELQPDSPTG VQDWATSFDR QLEFLQWLQS AEGGIAGGAT 

       730        740        750        760        770        780 
NSWKGSYDTP PTGLSQFYGM YYDWQPVWND PPSNNWFGFQ VWNMERVAQL YYVTGDARAE 

       790        800        810        820        830        840 
AILDKWVPWA IQHTDVDADN GGQNFQVPSD LEWSGQPDTW TGTYTGNPNL HVQVVSYSQD 

       850        860        870        880        890        900 
VGVTAALAKT LMYYAKRSGD TTALATAEGL LDALLAHRDS IGIATPEQPS WDRLDDPWDG 

       910        920        930        940        950        960 
SEGLYVPPGW SGTMPNGDRI EPGATFLSIR SFYKNDPLWP QVEAHLNDPQ NVPAPIVERH 

       970        980 
RFWAQVEIAT AFAAHDELFG AGAP

« Hide

References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed: 17209016] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000088 Genomic DNA. Translation: AAZ55992.1.
RefSeqYP_290015.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47NH7.
SMRQ47NH7. Positions 338-981.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ47NH7.

Protein family/group databases

CAZyCBM2. Carbohydrate-Binding Module Family 2.
GH48. Glycoside Hydrolase Family 48.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3580184.
GenomeReviewsGene locus Tfu_1959 in contig CP000088_GR.
KEGGtfu:Tfu_1959.
NMPDRfig|269800.4.peg.2558.
PATRIC23904542. VBITheFus33945_2105.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3979.
HOGENOMHBG345030.
OMAGMHWLLD.

Enzyme and pathway databases

BioCycTFUS269800:TFU_1959-MONOMER.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR000556. Glyco_hydro_48F.
IPR000601. PKD_dom.
[Graphical view]
Gene3DG3DSA:2.60.40.290. CBD_carb_bd. 1 hit.
G3DSA:1.50.10.10. CelA/Cel48F_cat. 4 hits.
KOK01225.
PfamPF00553. CBM_2. 1 hit.
PF02011. Glyco_hydro_48. 1 hit.
[Graphical view]
PRINTSPR00844. GLHYDRLASE48.
SMARTSM00637. CBD_II. 1 hit.
[Graphical view]
SUPFAMSSF49384. Cellul_bind. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
SSF49299. PKD. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47NH7_THEFY
AccessionPrimary (citable) accession number: Q47NH7
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info