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Q47N53 (Q47N53_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tfu_2083 EMBL AAZ56116.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ56116.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length672 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47N53 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: B725516667E50923

FASTA67272,372
        10         20         30         40         50         60 
MNGSTGTTDG FAGSGGKTDA LVAGMSDPAG TAFQYAPTAM LVADPAGAVL AVNDTFTALL 

        70         80         90        100        110        120 
GRPSTEIAGR PWPELFTPDD HGRAWEQHNK ALRGAAPRQW PDLTIRTADG LSRRTIVQAR 

       130        140        150        160        170        180 
SFPAAPGGET AGVVIQLSLL SHDEETLRIV TELRLREANT ALWSLDLTSG TLSELFGPSP 

       190        200        210        220        230        240 
LARMLAGDAC TLEECLARVH RDDVSRLRAA LETAYQGGNY EQRFRMFDQV GDERWLYARA 

       250        260        270        280        290        300 
TYLGGDRPRL VGIVDDMTEH VQLVRRLADR RRIEAAQGRQ VNELAAKLVS ATTVQEVTNL 

       310        320        330        340        350        360 
LSREFTPIFG GDGAHVVLLD DTELRLYPES TASTGQWLYP DNHRDSAHPV GAVLHDSQPR 

       370        380        390        400        410        420 
FFESRSELLE RFPALGEALC QTDDHSWAFV PMFGDGKTAI GVWVVAWTQP HHATPDERAL 

       430        440        450        460        470        480 
LLTLAGLAGQ ALQRVNRQSA ELELADAVQR RMLPPQPPAF SELDVAVRYL PARAGWRVCG 

       490        500        510        520        530        540 
DFYDAIRLPG RRIGLVVGDV QGHGVEAAAA MGQIRMAFRA YATNQSDPGT VLTETNRLLT 

       550        560        570        580        590        600 
ETGEIVFATC GYLVIDIDLG QLQAAWAGQP PVVLATESGF EVWEPETGPP VGVDAEAKYP 

       610        620        630        640        650        660 
VSSRPLPPGS TLLMCSDGLV ESAEVNMDDG LAAVGSELSA KVTDVHGAAT ALAELAPAGR 

       670 
GDDIAILVAR VR 

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References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ56116.1.
RefSeqYP_290139.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47N53.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_2083.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ56116; AAZ56116; Tfu_2083.
GeneID3579343.
KEGGtfu:Tfu_2083.
PATRIC23904810. VBITheFus33945_2238.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000133865.
OMAEREFATQ.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK2769474.

Enzyme and pathway databases

BioCycTFUS269800:GI42-2091-MONOMER.

Family and domain databases

InterProIPR003018. GAF.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13185. GAF_2. 1 hit.
PF08447. PAS_3. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47N53_THEFY
AccessionPrimary (citable) accession number: Q47N53
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)