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Q47MZ6 (Q47MZ6_THEFY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Tfu_2140 EMBL AAZ56173.1
OrganismThermobifida fusca (strain YX) [Complete proteome] [HAMAP] EMBL AAZ56173.1
Taxonomic identifier269800 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeNocardiopsaceaeThermobifida

Protein attributes

Sequence length688 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47MZ6 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: B15E0E65CE63E7D4

FASTA68876,210
        10         20         30         40         50         60 
MSTETSVPFL RVSPMHPVDS ALLDTLLKEA PIGFAFFTPD FCFQRVNRTL ATIYGRSADE 

        70         80         90        100        110        120 
CYGRTPDDVL PPPDAAEHKR ALSAVLAGES VVYSDHHLIG GTPRNPDEER HWALSWFPAY 

       130        140        150        160        170        180 
DEGKITGVAL IAVDISERHK AELALRRSEE RYRALMQASN QIVWAAARDG RVDEDCPEWR 

       190        200        210        220        230        240 
ALTGQSVEEY LAEGWLAAVH PDDRERVQLA WEDAVEDGTV FEENFRVRHH SGEYRHYRTR 

       250        260        270        280        290        300 
AVPLTRDNQV VEWVGTHVDV TATDEVRQLL TQQLQKAAMR TARLQKATAD LAEALTVDQV 

       310        320        330        340        350        360 
VNVMTEIGSS AVGVYRTAVA QLTPERLKLQ LLNDDGIPDV PGAPPREMRL EDLSMMTLAV 

       370        380        390        400        410        420 
RESRTIIAGS PEALREVMKD HENTLTYLEH TDERAWIALP MMSAGRPIGA LRFSFREPRE 

       430        440        450        460        470        480 
ISEEERTFLE ALAGQCALAL ERAALYEREH NTAEALQKSL LPEELPEVRG IRLGKLYNPG 

       490        500        510        520        530        540 
TKYVQVGGDW YDAFRLTDGR VAGVLGDVMG KGIKAATGMS RVRNALRALA FSMPEPADVL 

       550        560        570        580        590        600 
TGLDNLFAAT ESNDQITTLI YFVLDPESGH GTLANAGHLP PLLIPEEGEP RLLETEPSTP 

       610        620        630        640        650        660 
LGIPLPREQH KFFVPPGNTM VLYSDGLVEN RKRAAGAGLE ELVTAASRAP AEVVGDPQKI 

       670        680 
LKYLVERMLA GHDQDDDVTL LAVHVPAT 

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References

[1]"Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX."
Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B., Kyrpides N.
J. Bacteriol. 189:2477-2486(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YX.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000088 Genomic DNA. Translation: AAZ56173.1.
RefSeqYP_290196.1. NC_007333.1.

3D structure databases

ProteinModelPortalQ47MZ6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269800.Tfu_2140.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ56173; AAZ56173; Tfu_2140.
GeneID3581983.
KEGGtfu:Tfu_2140.
PATRIC23904942. VBITheFus33945_2297.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000105720.
OMALAFSMPE.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycTFUS269800:GI42-2155-MONOMER.

Family and domain databases

Gene3D3.30.450.40. 1 hit.
InterProIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001610. PAC.
IPR000014. PAS.
IPR013656. PAS_4.
IPR013655. PAS_fold_3.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13185. GAF_2. 1 hit.
PF08447. PAS_3. 1 hit.
PF08448. PAS_4. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 2 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 2 hits.
PROSITEPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47MZ6_THEFY
AccessionPrimary (citable) accession number: Q47MZ6
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: June 11, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)