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Reviewed, UniProtKB/Swiss-Prot Q47IJ4 (GLGA_DECAR)

Last modified November 3, 2009. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Glycogen synthase
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase
Gene names
Name: glgA
Ordered Locus Names: Daro_0580
OrganismDechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP]
Taxonomic identifier159087 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Dechloromonas

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Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

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Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycogen biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Molecular functionstarch synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 485485Glycogen synthase HAMAP MF_00484
PRO_0000230239

Sites

Binding site181ADP-glucose By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q47IJ4-1 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: F129C9391722F697

FASTA48552,712
        10         20         30         40         50         60 
MSSLSILFAT SEMAPWVKTG GLGDVAAALP AALRKAGHDI RVLLPAYPAL KQAFPTATTV 

        70         80         90        100        110        120 
AELPAFAPGL PASRLLAAQT GKLELLLLDC PELYDRPGNP YLDATGRDWP DNALRFGLLS 

       130        140        150        160        170        180 
RVAARLGQPD SPLSWQPDIV HANDWQTALA PAYLHYQGGA ASVVTVHNIA FQGCFGREML 

       190        200        210        220        230        240 
AALGLPEHAW RFDGVEYHDQ LSFLKAGLQL ASQISTVSPT YAREIQDEHF GYGLAPLLRH 

       250        260        270        280        290        300 
RSAELRGILN GVDTDLWNPA TDPVLATGYA ANRLAAKRTN KAALQTEMGL EVTADRPLFG 

       310        320        330        340        350        360 
VISRLTSQKG LDLLLTVAEG LPELPAQLVV LGSGDKLMEA GFVELAKRFP AQIVVKIGFD 

       370        380        390        400        410        420 
EGLAHRIEAG ADCFVMPSRF EPCGLNQMYS LRYGTPPIVR ATGGLADTVV DVCEDTLADK 

       430        440        450        460        470        480 
SANGFVLDGD TPHALWLTIE HVCRTWQDKK LWQRIQQNGM RRDFSWTHAA NEYVALYRDA 


IATRA

« Hide

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References

[1]"Complete sequence of Dechloromonas aromatica RCB."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000089 Genomic DNA. Translation: AAZ45337.1.
RefSeqYP_283807.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ47IJ4.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Genome annotation databases

GeneID3568806.
GenomeReviewsGene locus Daro_0580 in contig CP000089_GR.
KEGGdar:Daro_0580.
NMPDRfig|159087.4.peg.429.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ47IJ4.
OMAYQGPWRW.

Enzyme and pathway databases

BioCycDARO159087:DARO_0580-MON.

Family and domain databases

HAMAPMF_00484.
[Tree]
InterProIPR011835. GlgA.
IPR001296. Glyco_trans_1.
IPR013534. Glyco_transf_5.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

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Entry information

Entry nameGLGA_DECAR
AccessionPrimary (citable) accession number: Q47IJ4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: September 13, 2005
Last modified: November 3, 2009
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents