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Q47I46

- Q47I46_DECAR

UniProt

Q47I46 - Q47I46_DECAR

Protein
Submitted name:

PAS protein

Gene

Daro_0729

Organism
Dechloromonas aromatica (strain RCB)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. transmembrane signaling receptor activity Source: InterPro

    GO - Biological processi

    1. chemotaxis Source: InterPro

    Enzyme and pathway databases

    BioCyciDARO159087:GI5B-753-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    PAS proteinImported
    Gene namesi
    Ordered Locus Names:Daro_0729Imported
    OrganismiDechloromonas aromatica (strain RCB)Imported
    Taxonomic identifieri159087 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas
    ProteomesiUP000000550: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi159087.Daro_0729.

    Structurei

    3D structure databases

    ProteinModelPortaliQ47I46.
    SMRiQ47I46. Positions 674-897.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2202.
    HOGENOMiHOG000148074.
    KOiK03406.
    OMAiTHRATIR.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    InterProiIPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    IPR001610. PAC.
    IPR000014. PAS.
    IPR013655. PAS_fold_3.
    IPR000727. T_SNARE_dom.
    [Graphical view]
    PfamiPF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    PF08447. PAS_3. 1 hit.
    PF02203. TarH. 1 hit.
    [Graphical view]
    SMARTiSM00304. HAMP. 2 hits.
    SM00283. MA. 1 hit.
    SM00086. PAC. 1 hit.
    SM00091. PAS. 2 hits.
    [Graphical view]
    SUPFAMiSSF55785. SSF55785. 1 hit.
    TIGRFAMsiTIGR00229. sensory_box. 1 hit.
    PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 2 hits.
    PS50112. PAS. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q47I46-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRTNLPVTTV EQHLRDDTLI VSKTDLKGRI TYINRDFLDI SGFTEQELIG    50
    EPHNLVRHPE MPPEAFEDLW RDLKDGRPWT GMVKNRCKNG DYYWVLATVT 100
    PIREGGEILG YMSVRRKASA QQIQAAEEAY RLFREKRQGS LQIRHGAAVK 150
    GGPGLLSALS LKSRMAAGFA VILLVVAVVA GLGLWGMGRS DDAVARLYSS 200
    RLEPVQELAA IGKLMADNRS QVLLAFQHDP ASPNAKSHDH SVDKHLGVID 250
    KNIGIITGHW ERYSKAIASD EHRQLADAYV AARKVYVTEG LLAAKAAIAT 300
    GRFDEANDIL LKKLNPAYEE ASKRADDLYQ LQISRGKTQL EETDKAYQQF 350
    RIIVIAIVLA ALAFGALVAW SIMRSVMRPL DDIIATFQSL ARGDYTRNVD 400
    IARNDELGKV MQGLQSMQIQ QGFNVAEATR VGEENLRIKI GLDNVATNVM 450
    IADDGLNIIY MNHAVTQMFA AVESDIRKDL PQFSAASLMG SNIDIFHKSP 500
    AHQRGMLERL TGTHRATIRL GGRVFALTVT PVINTRGGRL GFAVEWLDRT 550
    NEVAVEEEVN QIVSAAANGD FTKRVSDAGK TGFFLTLAGD LNRLLETSQR 600
    GLEDVVVVLS AMADGDLTKT IEAEYAGTFG QLKDDANTTV ARLQEIVGQI 650
    KESTDAINTA AKEIASGNQD LSSRTEEQAS SLEETASSME QLTSTVKQNA 700
    DNARQANELA GNAQRVAVKG GEVVGQVVDT MSAIHQSSSK IADIIGVIDG 750
    IAFQTNILAL NAAVEAARAG EQGRGFAVVA TEVRNLAQRS AAAAKEIKGL 800
    ISDSVEKVET GNKLVDQAGR TMEEVVSSIK RVAKIMGDIS DASREQSSGI 850
    EQVSLAVSQM DEVTQQNAAL VEEAAAAAES LEEQAHNLAQ AVSVFKVANA 900
    GGMPRLEAPR TSQRASVPQA PRGERIGARK VQALPSSLDD EWEEF 945
    Length:945
    Mass (Da):102,570
    Last modified:September 13, 2005 - v1
    Checksum:iC15437FFF4D064D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000089 Genomic DNA. Translation: AAZ45485.1.
    RefSeqiYP_283955.1. NC_007298.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ45485; AAZ45485; Daro_0729.
    GeneIDi3569120.
    KEGGidar:Daro_0729.
    PATRICi21600084. VBIDecAro89105_0735.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000089 Genomic DNA. Translation: AAZ45485.1 .
    RefSeqi YP_283955.1. NC_007298.1.

    3D structure databases

    ProteinModelPortali Q47I46.
    SMRi Q47I46. Positions 674-897.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 159087.Daro_0729.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ45485 ; AAZ45485 ; Daro_0729 .
    GeneIDi 3569120.
    KEGGi dar:Daro_0729.
    PATRICi 21600084. VBIDecAro89105_0735.

    Phylogenomic databases

    eggNOGi COG2202.
    HOGENOMi HOG000148074.
    KOi K03406.
    OMAi THRATIR.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci DARO159087:GI5B-753-MONOMER.

    Family and domain databases

    InterProi IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    IPR001610. PAC.
    IPR000014. PAS.
    IPR013655. PAS_fold_3.
    IPR000727. T_SNARE_dom.
    [Graphical view ]
    Pfami PF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    PF08447. PAS_3. 1 hit.
    PF02203. TarH. 1 hit.
    [Graphical view ]
    SMARTi SM00304. HAMP. 2 hits.
    SM00283. MA. 1 hit.
    SM00086. PAC. 1 hit.
    SM00091. PAS. 2 hits.
    [Graphical view ]
    SUPFAMi SSF55785. SSF55785. 1 hit.
    TIGRFAMsi TIGR00229. sensory_box. 1 hit.
    PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 2 hits.
    PS50112. PAS. 1 hit.
    PS50192. T_SNARE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation."
      Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G., Lapidus A.
      BMC Genomics 10:351-351(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RCBImported.

    Entry informationi

    Entry nameiQ47I46_DECAR
    AccessioniPrimary (citable) accession number: Q47I46
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3