Reviewed, UniProtKB/Swiss-Prot Q47H71 (SELD_DECAR)

Names and origin

Protein names

Recommended name:
    Selenide, water dikinase
    EC=2.7.9.3
Alternative name(s):
    Selenophosphate synthetase
    Selenium donor protein

Gene names

Name:	selD
Ordered Locus Names:	Daro_1054

Organism

Dechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP]

Taxonomic identifier

159087 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Dechloromonas

Protein attributes

Sequence length	348 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes selenophosphate from selenide and ATP By similarity.
Catalytic activity	ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625
Cofactor	Magnesium By similarity.
Sequence similarities	Belongs to the selenophosphate synthetase 1 family. Class I subfamily.

Ontologies

Keywords
Ligand	ATP-binding Magnesium Nucleotide-binding Selenium
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP selenide, water dikinase activity Inferred from electronic annotation. Source: HAMAP selenium binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 348	348	Selenide, water dikinase HAMAP MF_00625		PRO_0000318666
Regions
	Nucleotide binding	230 – 236	7	ATP Potential
Sites
	Active site	17	1	Potential
	Site	20	1	Important for catalytic activity By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q47H71-1 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 172C2B617405E1E5	FASTA	348	36,162
	10 20 30 40 50 60 MPEEKIRLTQ LSHGGGCGCK IAPAVLQKIL AGTTGSIIPP QLLVGTETSD DAAVYQINAQ 70 80 90 100 110 120 QAIVATTDFF MPIVDNPRDF GRIAATNAIS DVYAMGGTPL FALALVGMPV NVLPLETIGQ 130 140 150 160 170 180 ILQGGEDVCR AAGIPIAGGH TIDSVEPIYG LVAIGLVNPE HLKRNSGAKS GDKLILGKQL 190 200 210 220 230 240 GVGIYSAALK KDQLQAKDYE AMVETTTQLN TPGPVLACLD GVHAVTDVTG FGLAGHLLEV 250 260 270 280 290 300 CKGSGLRATV NYQDLPVLPK AREFMQAGLM TGASGRNWAS YGEGVRIADG LEGIAQTLLT 310 320 330 340 DPQTSGGLLV SCSPETVTEV LSLFLQHGFP HVSVIGEMAE GEPGIDVI

References

[1]

"Complete sequence of Dechloromonas aromatica RCB." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000089 Genomic DNA. Translation: AAZ45810.1.
RefSeq	YP_284280.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q47H71.
Genome annotation databases
GeneID	3568217.
GenomeReviews	Gene locus Daro_1054 in contig CP000089_GR.
KEGG	dar:Daro_1054.
NMPDR	fig|159087.4.peg.1576.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q47H71.
OMA	GGRFACQ.
Enzyme and pathway databases
BioCyc	DARO159087:DARO_1054-MON.
Family and domain databases
HAMAP	MF_00625. [Tree]
InterPro	IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR004536. SelD. [Graphical view]
Pfam	PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view]
PIRSF	PIRSF036407. Selenphspht_syn. 1 hit.
TIGRFAMs	TIGR00476. selD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

SELD_DECAR

Accession

Primary (citable) accession number: Q47H71

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 26, 2008
Last sequence update:	September 13, 2005
Last modified:	November 3, 2009
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)