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Protein
Submitted name:

Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer

Gene

Daro_1143

Organism
Dechloromonas aromatica (strain RCB)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseImported, Transferase

Enzyme and pathway databases

BioCyciDARO159087:GI5B-1186-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Daro_1143Imported
OrganismiDechloromonas aromatica (strain RCB)Imported
Taxonomic identifieri159087 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas
ProteomesiUP000000550 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3030 PotentialImportedAdd
BLAST
Chaini31 – 541511 PotentialImportedPRO_5000099835Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi159087.Daro_1143.

Structurei

3D structure databases

ProteinModelPortaliQ47GY2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiKGNQARK.
OrthoDBiEOG60W7RK.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q47GY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKNLKIGTR LGLGFGFVLI LLTAISVISY TRLGTLNESI NDMVSDKFPK
60 70 80 90 100
TVIANDIVNN INLVARAIRN AALVKRPEDV SKELDRVADA RKKITESFAK
110 120 130 140 150
LEKLILSEEG KKTLAKATEA RKAYLGDQEA ALELLKASKK DEAVDLLITK
160 170 180 190 200
VRKSQADYIA AVNELIAFQS AMMEKEGKNA AEMVNNAKQL ILAMAIGAIL
210 220 230 240 250
IAAGFAWWVT RSITRPINEA VRAATALSEG DLTVKLESDS QDEIGHLMAA
260 270 280 290 300
MQNMIGKLTQ IIGEVRTAAD NLTNAAGQVS ATAQSLSQSS SEQAASVEET
310 320 330 340 350
TSSMEQMTAS ISQNTENAKV TDGMASKAAA EASDGGEAVM QTVEAMKSIA
360 370 380 390 400
DKIGIIDDIA YQTNLLALNA AIEAARAGDH GKGFAVVAAE VRKLAERSQV
410 420 430 440 450
AAQEIGGLAS SSVKQAERAG TLLVEMVPSI RKTSDLVQEI AAASAEQSSG
460 470 480 490 500
VAQINGAMGQ LNQATQQNAS ASEELAATAE ELGSQAEQLQ QTMTFFQLDD
510 520 530 540
GQRRSAQNFA PPSRSSAGGA KPRVATRTAA VQINEGDFER Y
Length:541
Mass (Da):57,385
Last modified:September 13, 2005 - v1
Checksum:i119795EE89AAC35F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ45899.1.
RefSeqiWP_011286908.1. NC_007298.1.

Genome annotation databases

EnsemblBacteriaiAAZ45899; AAZ45899; Daro_1143.
KEGGidar:Daro_1143.
PATRICi21600936. VBIDecAro89105_1143.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ45899.1.
RefSeqiWP_011286908.1. NC_007298.1.

3D structure databases

ProteinModelPortaliQ47GY2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi159087.Daro_1143.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ45899; AAZ45899; Daro_1143.
KEGGidar:Daro_1143.
PATRICi21600936. VBIDecAro89105_1143.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiKGNQARK.
OrthoDBiEOG60W7RK.

Enzyme and pathway databases

BioCyciDARO159087:GI5B-1186-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation."
    Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G., Lapidus A.
    BMC Genomics 10:351-351(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RCBImported.

Entry informationi

Entry nameiQ47GY2_DECAR
AccessioniPrimary (citable) accession number: Q47GY2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: July 22, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.