Q47FW8 (Q47FW8_DECAR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Nitrogen fixation protein NifU PIRNR PIRNR000375

Gene names

Ordered Locus Names:

Daro_1514

Organism

Dechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP] EMBL AAZ46263.1

Taxonomic identifier

159087 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Dechloromonas › Dechloromonas aromatica

Protein attributes

Sequence length	298 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins By similarity. PIRNR PIRNR000375
Sequence similarities	Belongs to the NifU family. PIRNR PIRNR000375

Ontologies

Keywords
Biological process	Nitrogen fixation PIRNR PIRNR000375
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	iron-sulfur cluster assembly Inferred from electronic annotation. Source: InterPro nitrogen fixation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	iron ion binding Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q47FW8 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: A7D1C7C326E2C56D	FASTA	298	32,120
	10 20 30 40 50 60 MWEYSDKVRE HFFNPRNSGP LEEANGIGDV GSIQCGDALR LMLKVEPETE IILDAHFQTF 70 80 90 100 110 120 GCGSAIASSS ALTEMVKGMT LDQALEVSNQ NIADYLDGLP PEKMHCSVMG REALQAAIAN 130 140 150 160 170 180 YRGEEWSDDH EEGALICKCF AIDAVMIEDV VKANNLNTVE EVTFYTKAGG GCAACHEGIE 190 200 210 220 230 240 EILAQVKAER AGPGEVSPPP ACPATPEAPK PPTKKLSIVE KIAKIQEVLE SVRPMLLRDH 250 260 270 280 290 GDVELADVQG KKIYVHLKGA CSGCMMEAAT LGGIQQKMIE TLGELVQVLP SSHMPVEA

References

[1]

"Complete sequence of Dechloromonas aromatica RCB." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RCB.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000089 Genomic DNA. Translation: AAZ46263.1.
RefSeq	YP_284733.1. NC_007298.1.
3D structure databases
ProteinModelPortal	Q47FW8.
ModBase	Search...
Protein-protein interaction databases
STRING	159087.Daro_1514.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAZ46263; AAZ46263; Daro_1514.
GeneID	3568966.
KEGG	dar:Daro_1514.
PATRIC	21601658. VBIDecAro89105_1496.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0822.
HOGENOM	HOG000069228.
KO	K13819.
OMA	AFCKSCV.
ProtClustDB	CLSK928002.
Enzyme and pathway databases
BioCyc	DARO159087:GI5B-1593-MONOMER.
Family and domain databases
InterPro	IPR007419. BFD-like_2Fe2S-bd_dom. IPR016217. N_fixation_NifU. IPR010238. NIF_FeS_clus_asmbl_NifU. IPR001075. NIF_FeS_clus_asmbl_NifU_C. IPR002871. NIF_FeS_clus_asmbl_NifU_N. [Graphical view]
Pfam	PF04324. Fer2_BFD. 1 hit. PF01106. NifU. 1 hit. PF01592. NifU_N. 1 hit. [Graphical view]
PIRSF	PIRSF000375. NifU. 1 hit.
ProDom	PD002830. NIF_FeS_clus_asmbl_NifU_C. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR02000. NifU_proper. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q47FW8_DECAR

Accession

Primary (citable) accession number: Q47FW8

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)