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Q47CH3 (Q47CH3_DECAR) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Daro_2728 EMBL AAZ47458.1
OrganismDechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP] EMBL AAZ47458.1
Taxonomic identifier159087 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AAZ47458.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL AAZ47458.1
Chain26 – 544519 Potential EMBL AAZ47458.1
PRO_5000100151

Sequences

Sequence LengthMass (Da)Tools
Q47CH3 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: A9F465EAC60196B9

FASTA54458,345
        10         20         30         40         50         60 
MSNQGMSLRS KLLAMTVMTV AALALLFTVL LINGKSQMLE DRQAKVRNLV EVAHGTMVFF 

        70         80         90        100        110        120 
EKEAREGRMT TEDAKKAAAA AIRLMRYDKV EYFWINDLTD TMIMHPIKPD MDGKKLDQLK 

       130        140        150        160        170        180 
DKNGKLFFAE MSRIVKSQGS GFVDYLWPKP GSEEGVPKIS FVMGFEPWGW LIGSGIYIDD 

       190        200        210        220        230        240 
IDTKFRSDAI KLLLWGLGIA GFIAISSLLL SNNIIRTLGG DPSLASSITK RIAAGDLATP 

       250        260        270        280        290        300 
VECDPNDKES LLANIRTMQE TLRGMIASIV SNAEQVAGAA NQLLSASEEV ADRATQQSDA 

       310        320        330        340        350        360 
ASSMAASVEQ MAVSIDQVKE NAAEAHGISQ AAGTLSEEGA AVIHRAASEM HKISDAVQSS 

       370        380        390        400        410        420 
SKIVEELGRQ SDHITSIVNT IKEIADQTNL LALNAAIEAA RAGEQGRGFA VVADEVRKLA 

       430        440        450        460        470        480 
ERTSLSTTEI AGMVSKIQNG TRSAVNSMQA GVEQVSNGVE LANQAGASIN QIRDGSSRVA 

       490        500        510        520        530        540 
IVVNGISDSI TEQSIASTEI AQKLETIAQM SEESAIAVHH TADAARHLQS LSASLHETVA 


RFRT 

« Hide

References

[1]"Complete sequence of Dechloromonas aromatica RCB."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RCB.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000089 Genomic DNA. Translation: AAZ47458.1.
RefSeqYP_285928.1. NC_007298.1.

3D structure databases

ProteinModelPortalQ47CH3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING159087.Daro_2728.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ47458; AAZ47458; Daro_2728.
GeneID3566877.
KEGGdar:Daro_2728.
PATRIC21604112. VBIDecAro89105_2705.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148080.
KOK03406.
OMAIEAWLME.
OrthoDBEOG6CK7NC.

Enzyme and pathway databases

BioCycDARO159087:GI5B-2797-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF08269. Cache_2. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM01049. Cache_2. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47CH3_DECAR
AccessionPrimary (citable) accession number: Q47CH3
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: November 13, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)