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Q47BV8

- Q47BV8_DECAR

UniProt

Q47BV8 - Q47BV8_DECAR

Protein

Superoxide dismutase [Cu-Zn]

Gene

Daro_2943

Organism
Dechloromonas aromatica (strain RCB)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (13 Sep 2005)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciDARO159087:GI5B-3014-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Daro_2943Imported
    OrganismiDechloromonas aromatica (strain RCB)Imported
    Taxonomic identifieri159087 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas
    ProteomesiUP000000550: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3131 PotentialImportedAdd
    BLAST
    Chaini32 – 172141 PotentialImportedPRO_5000100208Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi159087.Daro_2943.

    Structurei

    3D structure databases

    ProteinModelPortaliQ47BV8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG2032.
    HOGENOMiHOG000263448.
    KOiK04565.
    OMAiEIEVKLH.
    OrthoDBiEOG6K13RS.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    PRINTSiPR00068. CUZNDISMTASE.
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q47BV8-1 [UniParc]FASTAAdd to Basket

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    MLRRIGFALS AFSAIFLGAC ATPVMGPSAG ADLQARSGSM VSGKVSFSET    50
    GGRLRVEAMV SGLTPGEHGF HVHEAGDCSA PDASSAKGHF NPVSKSHGHY 100
    ASEEHHGGDM PNLVANAQGE AKYSAELKGL TLNGPNGVVG RSVVIHADPD 150
    DYKSQPAGNS GKRVACGVIA AR 172
    Length:172
    Mass (Da):17,554
    Last modified:September 13, 2005 - v1
    Checksum:i654C20DA8A4E5DB7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000089 Genomic DNA. Translation: AAZ47673.1.
    RefSeqiYP_286143.1. NC_007298.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ47673; AAZ47673; Daro_2943.
    GeneIDi3566133.
    KEGGidar:Daro_2943.
    PATRICi21604552. VBIDecAro89105_2923.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000089 Genomic DNA. Translation: AAZ47673.1 .
    RefSeqi YP_286143.1. NC_007298.1.

    3D structure databases

    ProteinModelPortali Q47BV8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 159087.Daro_2943.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ47673 ; AAZ47673 ; Daro_2943 .
    GeneIDi 3566133.
    KEGGi dar:Daro_2943.
    PATRICi 21604552. VBIDecAro89105_2923.

    Phylogenomic databases

    eggNOGi COG2032.
    HOGENOMi HOG000263448.
    KOi K04565.
    OMAi EIEVKLH.
    OrthoDBi EOG6K13RS.

    Enzyme and pathway databases

    BioCyci DARO159087:GI5B-3014-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    PRINTSi PR00068. CUZNDISMTASE.
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation."
      Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G., Lapidus A.
      BMC Genomics 10:351-351(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RCBImported.

    Entry informationi

    Entry nameiQ47BV8_DECAR
    AccessioniPrimary (citable) accession number: Q47BV8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3