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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Daro_3097

Organism
Dechloromonas aromatica (strain RCB)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDARO159087:GI5B-3170-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Daro_3097Imported
OrganismiDechloromonas aromatica (strain RCB)Imported
Taxonomic identifieri159087 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas
ProteomesiUP000000550 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi159087.Daro_3097.

Structurei

3D structure databases

ProteinModelPortaliQ47BF4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000099876.
KOiK03406.
OMAiVESACNS.
OrthoDBiEOG6JDW8S.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47BF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKMEIIRK LYDWNERTFW NSLTKKLMSF LLLFFIDVGY LGIYIHQKGV
60 70 80 90 100
IAAEVSKAGV ASEVLQRISD SLDQGLLLMI ALTAVALCWN VLQIVYIRHL
110 120 130 140 150
ILRPVRIIST IFDEIARGEG DFSRNLPTIT HDELRTLAEA YNRFADKMRE
160 170 180 190 200
IISEVRKMSV NIAREAVVVK RTVSSTAERA GRQGEIASAV FGASTEAMQA
210 220 230 240 250
IQEVSSSTEL ISHSTDANLA TARLSLNEMH EIVSKVHLVS DKLSTFNATV
260 270 280 290 300
DHLAQRSDSI RQIAGLIKDI ADQTNLLALN AAIEAARAGE MGRGFAVVAD
310 320 330 340 350
EVRKLAERVN VATQEIGENI GSMISLVRET QSENESINHD IKQTRVVVER
360 370 380 390 400
SSTEFQRMVG DFERTGDQLN QIAAAMEQLT ATNGQVHEAV TQVHDLSLEV
410 420 430 440 450
SGSMQASEQS AQTLSRATES VQELVSRFKI GRGAFDFNVD QARNFRDAIQ
460 470 480 490 500
QRLEQMANEG VNIWDQNYQP QPRTNPQKYE VSYCRAFEQQ IQPMLENTLT
510 520 530 540 550
GLQGGVYALI IDTRGYGAIH NQKYSRPLTG NYDSDLVGNR TRRIWDDVTG
560 570 580 590 600
QRGAKNTLPL LVQTYARDTG EILSEINMPI MVAGRHWGAV RVGCESSVLL

QG
Length:602
Mass (Da):67,062
Last modified:September 13, 2005 - v1
Checksum:i508B143371EEFFEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ47827.1.
RefSeqiWP_011288825.1. NC_007298.1.
YP_286297.1. NC_007298.1.

Genome annotation databases

EnsemblBacteriaiAAZ47827; AAZ47827; Daro_3097.
KEGGidar:Daro_3097.
PATRICi21604862. VBIDecAro89105_3076.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ47827.1.
RefSeqiWP_011288825.1. NC_007298.1.
YP_286297.1. NC_007298.1.

3D structure databases

ProteinModelPortaliQ47BF4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi159087.Daro_3097.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ47827; AAZ47827; Daro_3097.
KEGGidar:Daro_3097.
PATRICi21604862. VBIDecAro89105_3076.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000099876.
KOiK03406.
OMAiVESACNS.
OrthoDBiEOG6JDW8S.

Enzyme and pathway databases

BioCyciDARO159087:GI5B-3170-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation."
    Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G., Lapidus A.
    BMC Genomics 10:351-351(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RCBImported.

Entry informationi

Entry nameiQ47BF4_DECAR
AccessioniPrimary (citable) accession number: Q47BF4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 27, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.