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Q47BD7 (Q47BD7_DECAR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:murI HAMAP MF_00258
Ordered Locus Names:Daro_3114
OrganismDechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP] EMBL AAZ47844.1
Taxonomic identifier159087 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Dechloromonas

Protein attributes

Sequence length269 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942

Catalytic activity

L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
Q47BD7 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 86252FCBD38CCF92

FASTA26928,209
        10         20         30         40         50         60 
MPAPRGILLN NQPIAVFDSG LGGLTVLRAL RDRLPQEDFF YFADTRFLPY GDRPEVFLRE 

        70         80         90        100        110        120 
RGVLIAKALA KQGAKALVIA CNTATAAAAE AIRAAIDLPV VALEPGVKPA VALTRSGVIG 

       130        140        150        160        170        180 
VLATTRTLAS ERFQRLVGNH ANHLRVIAQA CPGLAEAIEA QGPDSPQVAA LLDAFVTPLA 

       190        200        210        220        230        240 
AADADVVVLG CTHYPWVAGA IARRMPVGTS LLDTGEPVAR QLERLLAASH LLGGGHGRLT 

       250        260 
VATSGAPAAV SATVERLWGA NLHVEHWEP

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References

[1]"Complete sequence of Dechloromonas aromatica RCB."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000089 Genomic DNA. Translation: AAZ47844.1.
RefSeqYP_286314.1. NC_007298.1.

3D structure databases

ProteinModelPortalQ47BD7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ47BD7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3568165.
GenomeReviewsGene locus Daro_3114 in contig CP000089_GR.
KEGGdar:Daro_3114.
NMPDRfig|159087.4.peg.3176.
PATRIC21604898. VBIDecAro89105_3094.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0796.
HOGENOMHBG645102.
OMAARTNAMI.
PhylomeDBQ47BD7.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ47BD7_DECAR
AccessionPrimary (citable) accession number: Q47BD7
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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