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Q47AF5 (Q47AF5_DECAR) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamine--tRNA ligase HAMAP-Rule MF_00126
EC=6.1.1.18 HAMAP-Rule MF_00126
Alternative name(s):
Glutaminyl-tRNA synthetase HAMAP-Rule MF_00126
Gene names
Name:glnS HAMAP-Rule MF_00126
Ordered Locus Names:Daro_3447
OrganismDechloromonas aromatica (strain RCB) [Complete proteome] [HAMAP] EMBL AAZ48176.1
Taxonomic identifier159087 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Dechloromonas ›

Protein attributes

Sequence length601 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln). HAMAP-Rule MF_00126 SAAS SAAS004514

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00126 SAAS SAAS004514

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00126.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00126

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif305 – 3095"KMSKS" region By similarity HAMAP-Rule MF_00126

Sites

Binding site3081ATP By similarity HAMAP-Rule MF_00126

Sequences

Sequence LengthMass (Da)Tools
Q47AF5 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 178B8638DC75F8B8

FASTA60167,998
        10         20         30         40         50         60 
MSSPNQPANT PAPAANFIKN IVEADLAAGK HAQRHWAGHP GTAADHAAAP LDPAKLRTRF 

        70         80         90        100        110        120 
PPEPNGYLHF GHAKSILLNF GLAEQYGGRC HLRFDDTNPE KEDQEYVDSI VDAVKWLGCS 

       130        140        150        160        170        180 
WEKDGEANLY YASNYFDWML QCAEALIAAG HAYVDSQNAE EMRANRGTLT QPGKNSPFRD 

       190        200        210        220        230        240 
RSVAENMDLF KRMQAGEFAD GAHILRARID MAAPNINLRD PAIYRIRHAT HHNTGDKYCV 

       250        260        270        280        290        300 
YPMYTFAHPI EDALENITHS ICTLEFEDQR PFYDWLLERL AEAGLLQRPL PQQIEFSRLN 

       310        320        330        340        350        360 
LTYVVLSKRK LIQLVEEKHV TGWDDPRMPT LVGARRRGYS AEGFRLFADR IGVSKNDSLI 

       370        380        390        400        410        420 
DYVLFEDAMR EVMNESDLRR IAVLDPVKLI IDNYPDGQVE ECFAPNHPLH PELGQRSIPF 

       430        440        450        460        470        480 
SRELWIEGED FMEVPSKGFR RLFPGNMARL RYGYVVECTG CDKDENGKVI AVHCNYLPET 

       490        500        510        520        530        540 
KSGTPGADSV KVKGNLHWVS AAQSYQAEIR LYERLFKVPA PGARREGDAP DLERDFLDDM 

       550        560        570        580        590        600 
NTDSAKTITA QLEPCLRDAK PEERFQFERH GYFVADRVDS KPGAPVFNRA VTLKDSWGKA 


S

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References

[1]"Complete sequence of Dechloromonas aromatica RCB."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Trong S., Kellar K., Schmutz J., Larimer F., Land M., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RCB.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000089 Genomic DNA. Translation: AAZ48176.1.
RefSeqYP_286646.1. NC_007298.1.

3D structure databases

ProteinModelPortalQ47AF5.
ModBaseSearch...

Protein-protein interaction databases

STRING159087.Daro_3447.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ48176; AAZ48176; Daro_3447.
GeneID3567852.
KEGGdar:Daro_3447.
PATRIC21605568. VBIDecAro89105_3427.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0008.
HOGENOMHOG000259232.
KOK01886.
OMARMPTIAG.
ProtClustDBPRK05347.

Enzyme and pathway databases

BioCycDARO159087:GI5B-3526-MONOMER.

Family and domain databases

Gene3D1.10.1160.10. 1 hit.
2.40.240.10. 2 hits.
3.40.50.620. 2 hits.
HAMAPMF_00126. Gln_tRNA_synth.
InterProIPR004514. Gln-tRNA-synth_Ib.
IPR022861. Gln_tRNA_ligase_bac.
IPR000924. Glu/Gln-tRNA-synth_Ib.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ib_codon-bd.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PANTHERPTHR10119. PTHR10119. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
PF03950. tRNA-synt_1c_C. 1 hit.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
SUPFAMSSF50715. Ribosomal_L25rel. 1 hit.
TIGRFAMsTIGR00440. glnS. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47AF5_DECAR
AccessionPrimary (citable) accession number: Q47AF5
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info