Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Chemotaxis sensory transducer

Gene

Daro_4008

Organism
Dechloromonas aromatica (strain RCB)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciDARO159087:GI5B-4086-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Daro_4008Imported
OrganismiDechloromonas aromatica (strain RCB)Imported
Taxonomic identifieri159087 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeDechloromonas
ProteomesiUP000000550 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3838 PotentialImportedAdd
BLAST
Chaini39 – 428390 PotentialImportedPRO_5000100418Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi159087.Daro_4008.

Structurei

3D structure databases

ProteinModelPortaliQ478J6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
OMAiANIERQM.

Family and domain databases

InterProiIPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q478J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNSSSRSKA QLFLAILLLL ALGLGFLSPW ASAACLAVAL LVLLWPNASS
60 70 80 90 100
VKELSTLDAL LRQVGKGELV ARLPHAMGDP TLESIRVNLN SALDQTETAF
110 120 130 140 150
REILGAMQAS STGRTWRRLQ RPGLHGTFGT VLAQMQVLLD QLEEAQESIA
160 170 180 190 200
REALLSRIFL RSERGLSMAI EHVDKALFEV GGNSKLSQQL AGDFGESASA
210 220 230 240 250
MSSSAQRMSD ALGGAQQAAE AGVSALDDLN AKAAAIHLLT GQIEGVAKQT
260 270 280 290 300
NLLALNAAIE AARAGEAGRG FAVVADEVRK LADQAQRSAE EIAAAISAIS
310 320 330 340 350
TSMQSATVQI GDLQHAVSGA RLTAGEFSSE LANSATSANR VYDLASTIGE
360 370 380 390 400
GAHSMESSMR LVATAQRARA DVTAILHGEE VNISSLSEME QEAANIARSR
410 420
KWIKGSSDRE ALVAIYDSLF ANIERQMH
Length:428
Mass (Da):45,230
Last modified:September 13, 2005 - v1
Checksum:i29AC5BCF0D05688C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ48735.1.
RefSeqiWP_011289729.1. NC_007298.1.
YP_287205.1. NC_007298.1.

Genome annotation databases

EnsemblBacteriaiAAZ48735; AAZ48735; Daro_4008.
KEGGidar:Daro_4008.
PATRICi21606708. VBIDecAro89105_3994.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000089 Genomic DNA. Translation: AAZ48735.1.
RefSeqiWP_011289729.1. NC_007298.1.
YP_287205.1. NC_007298.1.

3D structure databases

ProteinModelPortaliQ478J6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi159087.Daro_4008.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ48735; AAZ48735; Daro_4008.
KEGGidar:Daro_4008.
PATRICi21606708. VBIDecAro89105_3994.

Phylogenomic databases

eggNOGiCOG0840.
OMAiANIERQM.

Enzyme and pathway databases

BioCyciDARO159087:GI5B-4086-MONOMER.

Family and domain databases

InterProiIPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation."
    Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G., Lapidus A.
    BMC Genomics 10:351-351(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RCBImported.

Entry informationi

Entry nameiQ478J6_DECAR
AccessioniPrimary (citable) accession number: Q478J6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 27, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.