Q47871 (Q47871_9FIRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Xylanase EMBL BAA09971.1
Organism	Eubacterium ruminantium EMBL BAA09971.1
Taxonomic identifier	42322 [NCBI]
Taxonomic lineage	Bacteria › Firmicutes › Clostridia › Clostridiales › Eubacteriaceae › Eubacterium

Protein attributes

Sequence length	827 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL BAA09971.1
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate catabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q47871 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 6E49C1FF93259BD3	FASTA	827	91,044
	10 20 30 40 50 60 MAAAMMLSAT ACGKKKDEAT SNDTAAVTTE AATSTVAEVE IDEDNILVNP YFLDDDVTAW 70 80 90 100 110 120 QAGQGSSKVG IADESVPLPD GYRRCAVIDR DPESSSPYDC FAQDITSSIS KGTEYQFEFY 130 140 150 160 170 180 AMLSSDYEGA PAEQRTVEFA PYITANGSTT YLGSYSAEIT GVSSQPLEPG KWTRFAGTFT 190 200 210 220 230 240 PQWSGNLDQA VIRVIEQGTD YGNGDCVKGD YYIAGFKLLG EKAEPVVYSV EKDIPSLASV 250 260 270 280 290 300 VSSEDGLGAD SICGTAVTGS EIDDEFIQEL ISKHFNAVTL GNELKMDAVF GYSNDTVPAI 310 320 330 340 350 360 EDEEADINGE KIKVPVMDHS RADKILDKIL EINEKNGANI KVRGHVLVWH SQAPEWFFHE 370 380 390 400 410 420 DYDKTKPYVD KDTMNLRLEW YIRELLNYYT GPDSKYRDLF YGWDVVNEAI SDGTGTYRTD 430 440 450 460 470 480 EEPGADQLSD STHGSKSSWW KVYGSNEFII NAFKYANRYA PATLKLYYND YNECDATKEA 490 500 510 520 530 540 GIIELINAVK EADGTRIDGF GMQGHYSVNA PTVDRIKEAI QDYSQVVDEV MITEFDVKAG 550 560 570 580 590 600 LGYDGTDETK DKEYTKQAHY FRKIYEAAKA LNAEGVHFSG ITMWGVVDKY SWLQSQNNVG 610 620 630 640 650 660 GSSDGTSLQC PLLFDDNYQA KPAYWAFVDP SKLGEEPVVV RPEINIKKGS ATVDGDIEEA 670 680 690 700 710 720 WDAAEAVSLS IKLGSDISAD GKLLWDEENL YVLVDVKDSV LNEDSEDDYQ QDSVEIFVDE 730 740 750 760 770 780 NNGKSGGYEA DDKQYRISFS NKQSFNGEKC VAENITSATK KTDDGYVVEA AIKWTDITPE 790 800 810 820 VGGKAGVELQ VNDATAEGVR CGTISWADDT GTGYMSPEVF GTVVFEE

References

[1]	"Partial characterization of structure and function of a xylanase gene from the rumen hemicellulolytic bacterium Eubacterium ruminatium." Taguchi H., Koike S., Kobayashi Y., Cann I.K.O., Karita S. Anim. Sci. J. 75:325-332(2004) Cited for: NUCLEOTIDE SEQUENCE. Strain: GA195 EMBL BAA09971.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D63938 Genomic DNA. Translation: BAA09971.1.
3D structure databases
HSSP	HSSP built from PDB template 1I8A based on UniProtKB Q60037.
ProteinModelPortal	Q47871.
ModBase	Search...
Protein family/group databases
CAZy	CBM9. Carbohydrate-Binding Module Family 9. GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR010502. Carb-bd_dom_fam9. IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR003305. CenC_carb-bd. IPR008979. Galactose-bd-like. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF06452. DUF1083. 1 hit. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q47871_9FIRM

Accession

Primary (citable) accession number: Q47871

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	October 19, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)