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Protein

Beta-xylanase

Gene
N/A
Organism
Eubacterium ruminantium
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM9. Carbohydrate-Binding Module Family 9.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
OrganismiEubacterium ruminantiumImported
Taxonomic identifieri42322 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Structurei

3D structure databases

ProteinModelPortaliQ47871.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini231 – 630GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST400

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.1190. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR010502. Carb-bd_dom_fam9.
IPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06452. CBM9_1. 1 hit.
PF02018. CBM_4_9. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47871-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAMMLSAT ACGKKKDEAT SNDTAAVTTE AATSTVAEVE IDEDNILVNP
60 70 80 90 100
YFLDDDVTAW QAGQGSSKVG IADESVPLPD GYRRCAVIDR DPESSSPYDC
110 120 130 140 150
FAQDITSSIS KGTEYQFEFY AMLSSDYEGA PAEQRTVEFA PYITANGSTT
160 170 180 190 200
YLGSYSAEIT GVSSQPLEPG KWTRFAGTFT PQWSGNLDQA VIRVIEQGTD
210 220 230 240 250
YGNGDCVKGD YYIAGFKLLG EKAEPVVYSV EKDIPSLASV VSSEDGLGAD
260 270 280 290 300
SICGTAVTGS EIDDEFIQEL ISKHFNAVTL GNELKMDAVF GYSNDTVPAI
310 320 330 340 350
EDEEADINGE KIKVPVMDHS RADKILDKIL EINEKNGANI KVRGHVLVWH
360 370 380 390 400
SQAPEWFFHE DYDKTKPYVD KDTMNLRLEW YIRELLNYYT GPDSKYRDLF
410 420 430 440 450
YGWDVVNEAI SDGTGTYRTD EEPGADQLSD STHGSKSSWW KVYGSNEFII
460 470 480 490 500
NAFKYANRYA PATLKLYYND YNECDATKEA GIIELINAVK EADGTRIDGF
510 520 530 540 550
GMQGHYSVNA PTVDRIKEAI QDYSQVVDEV MITEFDVKAG LGYDGTDETK
560 570 580 590 600
DKEYTKQAHY FRKIYEAAKA LNAEGVHFSG ITMWGVVDKY SWLQSQNNVG
610 620 630 640 650
GSSDGTSLQC PLLFDDNYQA KPAYWAFVDP SKLGEEPVVV RPEINIKKGS
660 670 680 690 700
ATVDGDIEEA WDAAEAVSLS IKLGSDISAD GKLLWDEENL YVLVDVKDSV
710 720 730 740 750
LNEDSEDDYQ QDSVEIFVDE NNGKSGGYEA DDKQYRISFS NKQSFNGEKC
760 770 780 790 800
VAENITSATK KTDDGYVVEA AIKWTDITPE VGGKAGVELQ VNDATAEGVR
810 820
CGTISWADDT GTGYMSPEVF GTVVFEE
Length:827
Mass (Da):91,044
Last modified:November 1, 1996 - v1
Checksum:i6E49C1FF93259BD3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63938 Genomic DNA. Translation: BAA09971.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D63938 Genomic DNA. Translation: BAA09971.1.

3D structure databases

ProteinModelPortaliQ47871.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM9. Carbohydrate-Binding Module Family 9.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.1190. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR010502. Carb-bd_dom_fam9.
IPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF06452. CBM9_1. 1 hit.
PF02018. CBM_4_9. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ47871_9FIRM
AccessioniPrimary (citable) accession number: Q47871
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.