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Protein

UPF0758 protein YkfG

Gene

ykfG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6122-MONOMER.
ECOL316407:JW0236-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0758 protein YkfG
Gene namesi
Name:ykfG
Ordered Locus Names:b0247, JW0236
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14331. ykfG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 158158UPF0758 protein YkfGPRO_0000190764Add
BLAST

Proteomic databases

PaxDbiQ47685.

Interactioni

Protein-protein interaction databases

BioGridi4261092. 94 interactions.
IntActiQ47685. 2 interactions.
STRINGi511145.b0247.

Structurei

3D structure databases

ProteinModelPortaliQ47685.
SMRiQ47685. Positions 43-158.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0758 family.Curated

Phylogenomic databases

eggNOGiENOG4108XS9. Bacteria.
COG2003. LUCA.
HOGENOMiHOG000273376.
InParanoidiQ47685.
KOiK03630.
OMAiDICFASS.
PhylomeDBiQ47685.

Family and domain databases

InterProiIPR001405. RadC.
IPR025657. RadC_JAB.
IPR020891. UPF0758_CS.
[Graphical view]
PfamiPF04002. RadC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00608. radc. 1 hit.
PROSITEiPS01302. UPF0758. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47685-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQLSFLPGE MTPQDRRLIQ RALRALDRHL HEPGVAFTST HAVREWLRLH
60 70 80 90 100
MAALEREEFR VLYLDNQNQL IAHETLFTGT INRTEVHPRE VVKRALHFNA
110 120 130 140 150
AAVILAHNHP SGETTPSQAD KTLTQRLVQV LQLVDIRVPD HLIVGGRQIY

SFAEHGLL
Length:158
Mass (Da):18,099
Last modified:November 1, 1996 - v1
Checksum:iFEA6E571EAD46582
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08667.1.
U00096 Genomic DNA. Translation: AAC73350.1.
AP009048 Genomic DNA. Translation: BAA77916.1.
PIRiG64749.
RefSeqiNP_414781.1. NC_000913.3.
WP_000811693.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73350; AAC73350; b0247.
BAA77916; BAA77916; BAA77916.
GeneIDi944930.
KEGGiecj:JW0236.
eco:b0247.
PATRICi32115611. VBIEscCol129921_0249.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08667.1.
U00096 Genomic DNA. Translation: AAC73350.1.
AP009048 Genomic DNA. Translation: BAA77916.1.
PIRiG64749.
RefSeqiNP_414781.1. NC_000913.3.
WP_000811693.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ47685.
SMRiQ47685. Positions 43-158.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261092. 94 interactions.
IntActiQ47685. 2 interactions.
STRINGi511145.b0247.

Proteomic databases

PaxDbiQ47685.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73350; AAC73350; b0247.
BAA77916; BAA77916; BAA77916.
GeneIDi944930.
KEGGiecj:JW0236.
eco:b0247.
PATRICi32115611. VBIEscCol129921_0249.

Organism-specific databases

EchoBASEiEB4077.
EcoGeneiEG14331. ykfG.

Phylogenomic databases

eggNOGiENOG4108XS9. Bacteria.
COG2003. LUCA.
HOGENOMiHOG000273376.
InParanoidiQ47685.
KOiK03630.
OMAiDICFASS.
PhylomeDBiQ47685.

Enzyme and pathway databases

BioCyciEcoCyc:G6122-MONOMER.
ECOL316407:JW0236-MONOMER.

Miscellaneous databases

PROiQ47685.

Family and domain databases

InterProiIPR001405. RadC.
IPR025657. RadC_JAB.
IPR020891. UPF0758_CS.
[Graphical view]
PfamiPF04002. RadC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00608. radc. 1 hit.
PROSITEiPS01302. UPF0758. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYKFG_ECOLI
AccessioniPrimary (citable) accession number: Q47685
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.