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Protein

UPF0758 protein YkfG

Gene

ykfG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi107Zinc; catalyticPROSITE-ProRule annotation1
Metal bindingi109Zinc; catalyticPROSITE-ProRule annotation1
Metal bindingi120Zinc; catalyticPROSITE-ProRule annotation1

Keywordsi

Molecular functionHydrolase, Metalloprotease, Protease
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciEcoCyc:G6122-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0758 protein YkfG
Gene namesi
Name:ykfG
Ordered Locus Names:b0247, JW0236
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14331. ykfG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001907641 – 158UPF0758 protein YkfGAdd BLAST158

Proteomic databases

PaxDbiQ47685.
PRIDEiQ47685.

Interactioni

Protein-protein interaction databases

BioGridi4261092. 94 interactors.
IntActiQ47685. 2 interactors.
STRINGi316385.ECDH10B_0230.

Structurei

3D structure databases

ProteinModelPortaliQ47685.
SMRiQ47685.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 158MPNPROSITE-ProRule annotationAdd BLAST123

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi107 – 120JAMM motifPROSITE-ProRule annotationAdd BLAST14

Sequence similaritiesi

Belongs to the UPF0758 family.Curated

Phylogenomic databases

eggNOGiENOG4108XS9. Bacteria.
COG2003. LUCA.
HOGENOMiHOG000273376.
InParanoidiQ47685.
KOiK03630.
PhylomeDBiQ47685.

Family and domain databases

CDDicd08071. MPN_DUF2466. 1 hit.
InterProiView protein in InterPro
IPR001405. RadC.
IPR025657. RadC_JAB.
IPR020891. UPF0758_CS.
PfamiView protein in Pfam
PF04002. RadC. 1 hit.
TIGRFAMsiTIGR00608. radc. 1 hit.
PROSITEiView protein in PROSITE
PS50249. MPN. 1 hit.
PS01302. UPF0758. 1 hit.

Sequencei

Sequence statusi: Complete.

Q47685-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQLSFLPGE MTPQDRRLIQ RALRALDRHL HEPGVAFTST HAVREWLRLH
60 70 80 90 100
MAALEREEFR VLYLDNQNQL IAHETLFTGT INRTEVHPRE VVKRALHFNA
110 120 130 140 150
AAVILAHNHP SGETTPSQAD KTLTQRLVQV LQLVDIRVPD HLIVGGRQIY

SFAEHGLL
Length:158
Mass (Da):18,099
Last modified:November 1, 1996 - v1
Checksum:iFEA6E571EAD46582
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08667.1.
U00096 Genomic DNA. Translation: AAC73350.1.
AP009048 Genomic DNA. Translation: BAA77916.1.
PIRiG64749.
RefSeqiNP_414781.1. NC_000913.3.
WP_000811693.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73350; AAC73350; b0247.
BAA77916; BAA77916; BAA77916.
GeneIDi29499441.
944930.
KEGGiecj:JW0236.
eco:b0247.
PATRICifig|1411691.4.peg.2035.

Similar proteinsi

Entry informationi

Entry nameiYKFG_ECOLI
AccessioniPrimary (citable) accession number: Q47685
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries