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Protein

Microcin C7 self-immunity protein MccF

Gene

mccF

Organism
Escherichia coli
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Involved in specific self-immunity to microcin C7.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Bacteriocin immunity

Protein family/group databases

MEROPSiS66.003.

Names & Taxonomyi

Protein namesi
Recommended name:
Microcin C7 self-immunity protein MccF
Gene namesi
Name:mccF
Encoded oniPlasmid pMccC70 Publication
OrganismiEscherichia coli
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 344344Microcin C7 self-immunity protein MccFPRO_0000172840Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-60028N.

Structurei

Secondary structure

1
344
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi18 – 225Combined sources
Helixi28 – 314Combined sources
Helixi33 – 4513Combined sources
Beta strandi49 – 524Combined sources
Turni54 – 574Combined sources
Beta strandi63 – 653Combined sources
Helixi67 – 7913Combined sources
Beta strandi83 – 897Combined sources
Helixi95 – 1017Combined sources
Helixi104 – 1096Combined sources
Beta strandi113 – 1164Combined sources
Helixi118 – 1203Combined sources
Helixi121 – 13111Combined sources
Beta strandi135 – 1373Combined sources
Helixi141 – 1455Combined sources
Helixi151 – 16414Combined sources
Beta strandi177 – 1804Combined sources
Beta strandi185 – 1873Combined sources
Beta strandi203 – 2064Combined sources
Beta strandi208 – 21811Combined sources
Helixi219 – 2224Combined sources
Turni223 – 2275Combined sources
Beta strandi239 – 2435Combined sources
Helixi249 – 26113Combined sources
Helixi264 – 2663Combined sources
Beta strandi269 – 2746Combined sources
Helixi288 – 2969Combined sources
Beta strandi303 – 3086Combined sources
Beta strandi310 – 3145Combined sources
Beta strandi318 – 32710Combined sources
Turni328 – 3314Combined sources
Beta strandi332 – 3354Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TLAX-ray1.20A/B2-344[»]
3TLBX-ray1.50A/B2-344[»]
3TLCX-ray1.30A/B2-344[»]
3TLEX-ray1.30A/B2-344[»]
3TLGX-ray1.50A/B2-344[»]
3TLYX-ray1.70A/B2-344[»]
3TLZX-ray1.50A/B2-344[»]
4IIXX-ray1.23A/B2-344[»]
4IIYX-ray1.20A/B2-344[»]
ProteinModelPortaliQ47511.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S66 family.Curated

Family and domain databases

Gene3Di3.40.50.10740. 1 hit.
3.50.30.60. 1 hit.
InterProiIPR027461. Carboxypeptidase_A_C.
IPR029062. Class_I_gatase-like.
IPR027478. LdcA_N_dom.
IPR003507. S66_fam.
[Graphical view]
PfamiPF02016. Peptidase_S66. 1 hit.
[Graphical view]
PIRSFiPIRSF028757. LD-carboxypeptidase. 1 hit.
SUPFAMiSSF141986. SSF141986. 1 hit.
SSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

Q47511-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMIQSHPLLA APLAVGDTIG FFSSSAPATV TAKNRFFRGV EFLQRKGFKL
60 70 80 90 100
VSGKLTGKTD FYRSGTIKER AQEFNELVYN PDITCIMSTI GGDNSNSLLP
110 120 130 140 150
FLDYDAIIAN PKIIIGYSDT TALLAGIYAK TGLITFYGPA LIPSFGEHPP
160 170 180 190 200
LVDITYESFI KILTRKQSGI YTYTLPEKWS DESINWNENK ILRPKKLYKN
210 220 230 240 250
NCAFYGSGKV EGRVIGGNLN TLTGIWGSEW MPEILNGDIL FIEDSRKSIA
260 270 280 290 300
TIERLFSMLK LNRVFDKVSA IILGKHELFD CAGSKRRPYE VLTEVLDGKQ
310 320 330 340
IPVLDGFDCS HTHPMLTLPL GVKLAIDFDN KNISITEQYL STEK
Length:344
Mass (Da):38,361
Last modified:November 1, 1996 - v1
Checksum:i759CEF7AB49E5C2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X57583 Genomic DNA. Translation: CAA40814.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X57583 Genomic DNA. Translation: CAA40814.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TLAX-ray1.20A/B2-344[»]
3TLBX-ray1.50A/B2-344[»]
3TLCX-ray1.30A/B2-344[»]
3TLEX-ray1.30A/B2-344[»]
3TLGX-ray1.50A/B2-344[»]
3TLYX-ray1.70A/B2-344[»]
3TLZX-ray1.50A/B2-344[»]
4IIXX-ray1.23A/B2-344[»]
4IIYX-ray1.20A/B2-344[»]
ProteinModelPortaliQ47511.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60028N.

Protein family/group databases

MEROPSiS66.003.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.50.10740. 1 hit.
3.50.30.60. 1 hit.
InterProiIPR027461. Carboxypeptidase_A_C.
IPR029062. Class_I_gatase-like.
IPR027478. LdcA_N_dom.
IPR003507. S66_fam.
[Graphical view]
PfamiPF02016. Peptidase_S66. 1 hit.
[Graphical view]
PIRSFiPIRSF028757. LD-carboxypeptidase. 1 hit.
SUPFAMiSSF141986. SSF141986. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Structure and organization of plasmid genes required to produce the translation inhibitor microcin C7."
    Gonzalez-Pastor J.E., San Millan J.L., Castilla M.A., Moreno F.
    J. Bacteriol. 177:7131-7140(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiMCCF_ECOLX
AccessioniPrimary (citable) accession number: Q47511
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Plasmid

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.