Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q47471 (Q47471_ERWCA) Unreviewed, UniProtKB/TrEMBL

Last modified November 2, 2010. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL CAA55814.1
Gene names
Name:pelB EMBL CAA55814.1
OrganismErwinia carotovora EMBL CAA55814.1
Taxonomic identifier554 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL CAA55814.1
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47471 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 3E7E0EECB120D799

FASTA34737,432
        10         20         30         40         50         60 
MFKYLTPIFL CTAAFSFQAQ ADDTMLMLLK KDNATYLSWS TDAGNVVRQD VYRSTSNNQA 

        70         80         90        100        110        120 
GSEKIAELNS TDRTFTDLTA NPKSDYWYWV DTVSSNNNVQ KSNAAQTAPA PLRAAPLKAA 

       130        140        150        160        170        180 
SSECKAGAVI KDKTVDCGGI TLGLSCTGDS DKQPPVITLE NATIKNLRIS EKGGSDGIHC 

       190        200        210        220        230        240 
KSGNCRIENV IWEDVCEDAA TNLGKTMTIV GGVAHNTTNG PGGKPDKVLQ QNAKNSHTIV 

       250        260        270        280        290        300 
QGNFTLTGQH GKLWRSCGDC TNNGGPRNLT IISATVNGTI DSIAGVNRNF GDVAEIRDLR 

       310        320        330        340 
IKNYKAGNPK ICEEFKGIEK GKGKTEKYGE FWDSKNCKVS RSNVKAL

« Hide

References

[1]"Characterization of a novel pectate lyase from Erwinia carotovora subsp. carotovora."
Heikinheimo R., Flego D., Pirhonen M., Karlsson M.B., Eriksson A., Mae A., Koiv V., Palva E.T.
Mol. Plant Microbe Interact. 8:207-217(1995) [PubMed: 7756691] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SCC3193 EMBL CAA55814.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		X79232 Genomic DNA. Translation: CAA55814.1.
PIRS44995.

3D structure databases

HSSPHSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ProteinModelPortalQ47471.
SMRQ47471. Positions 24-347.
ModBaseSearch...

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR013783. Ig-like_fold.
IPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.60.40.10. Ig-like_fold. 1 hit.
G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47471_ERWCA
AccessionPrimary (citable) accession number: Q47471
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 2, 2010
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info