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Protein
Submitted name:

Pectate lyase

Gene

pel-1

Organism
Pectobacterium carotovorum (Erwinia carotovora)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationImported
Biological processCarbohydrate metabolism, Polysaccharide degradationUniRule annotation

Protein family/group databases

CAZyiPL1. Polysaccharide Lyase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
Pectate lyaseImported
Gene namesi
Name:pel-1Imported
OrganismiPectobacterium carotovorum (Erwinia carotovora)Imported
Taxonomic identifieri554 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium

Subcellular locationi

  • Secreted UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

SecretedUniRule annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500423309123 – 374Sequence analysisAdd BLAST352

Proteomic databases

PRIDEiQ47467.

Structurei

3D structure databases

ProteinModelPortaliQ47467.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 284Amb_allInterPro annotationAdd BLAST236

Sequence similaritiesi

Belongs to the polysaccharide lyase 1 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
InterProiView protein in InterPro
IPR002022. Pec_lyase.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
PfamiView protein in Pfam
PF00544. Pec_lyase_C. 1 hit.
SMARTiView protein in SMART
SM00656. Amb_all. 1 hit.
SUPFAMiSSF51126. SSF51126. 1 hit.

Sequencei

Sequence statusi: Complete.

Q47467-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYLLPTAAA GLLLLAAQPA MAANTGGYAT TDGGEVSGAV KKTARSMKEI
60 70 80 90 100
VDILKPRKWI QKARKSKAVP YPLIITYSGN EDSLIKAAEK NICGQWSKDA
110 120 130 140 150
RGVQIKEFTK GITIQGTNGS SANFGVWIVN SSNVVVRNMR FGYMPGGAQD
160 170 180 190 200
GDAIRIDNSP NVWIDHNEIF AKNFECKGTP DNDTTFESAV DIKKGSTNVT
210 220 230 240 250
VSYNYIHGIK KVGLSGATNT DTGRNLTYHH NIYSDVNSRL PLQRGGLVHA
260 270 280 290 300
YNNLYDGITG SGFNVRQKGI ALIESNWFEN ALNPVTARND SSNFGTWELR
310 320 330 340 350
NNNITKPADF SKYKITWGKP SSPHINADDW KSTGKFPAVS YKYTPVSAQC
360 370
VKDKLANYAG VGKNLAVLTA ANCK
Length:374
Mass (Da):40,686
Last modified:November 1, 1996 - v1
Checksum:i99D1843197E09156
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L32171 Genomic DNA. Translation: AAA73933.1.

Similar proteinsi

Entry informationi

Entry nameiQ47467_PECCA
AccessioniPrimary (citable) accession number: Q47467
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)