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Q47467 (Q47467_ERWCA) Unreviewed, UniProtKB/TrEMBL

Last modified August 10, 2010. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL AAA73933.1
Gene names
Name:pel-1 EMBL AAA73933.1
OrganismErwinia carotovora EMBL AAA73933.1
Taxonomic identifier554 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AAA73933.1
Gene Ontology (GO)
   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47467 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 99D1843197E09156

FASTA37440,686
        10         20         30         40         50         60 
MKYLLPTAAA GLLLLAAQPA MAANTGGYAT TDGGEVSGAV KKTARSMKEI VDILKPRKWI 

        70         80         90        100        110        120 
QKARKSKAVP YPLIITYSGN EDSLIKAAEK NICGQWSKDA RGVQIKEFTK GITIQGTNGS 

       130        140        150        160        170        180 
SANFGVWIVN SSNVVVRNMR FGYMPGGAQD GDAIRIDNSP NVWIDHNEIF AKNFECKGTP 

       190        200        210        220        230        240 
DNDTTFESAV DIKKGSTNVT VSYNYIHGIK KVGLSGATNT DTGRNLTYHH NIYSDVNSRL 

       250        260        270        280        290        300 
PLQRGGLVHA YNNLYDGITG SGFNVRQKGI ALIESNWFEN ALNPVTARND SSNFGTWELR 

       310        320        330        340        350        360 
NNNITKPADF SKYKITWGKP SSPHINADDW KSTGKFPAVS YKYTPVSAQC VKDKLANYAG 

       370 
VGKNLAVLTA ANCK

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References

[1]"Nucleotide sequence of a pectate lyase structural gene, pel1 of Erwinia carotovora subsp. carotovora strain 71 and structural relationship of pel1 with other pel genes of Erwinia species."
Chatterjee A., Liu Y., Chatterjee A.K.
Mol. Plant Microbe Interact. 8:92-95(1995) [PubMed: 7772808] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 71 EMBL AAA73933.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		L32171 Genomic DNA. Translation: AAA73933.1.

3D structure databases

HSSPHSSP built from PDB template 1AIR based on UniProtKB P11073.
ProteinModelPortalQ47467.
SMRQ47467. Positions 22-373.
ModBaseSearch...

Protein family/group databases

CAZyPL1. Polysaccharide Lyase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR002022. Amb_allergen.
IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF00544. Pec_lyase_C. 1 hit.
[Graphical view]
SMARTSM00656. Amb_all. 1 hit.
SM00710. PbH1. 5 hits.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47467_ERWCA
AccessionPrimary (citable) accession number: Q47467
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 10, 2010
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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