Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q47465 (Q47465_ERWCA) Unreviewed, UniProtKB/TrEMBL

Last modified November 2, 2010. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Pectate lyase EMBL AAA57140.1
Gene names
Name:pel-3 EMBL AAA57140.1
OrganismErwinia carotovora EMBL AAA57140.1
Taxonomic identifier554 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AAA57140.1
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47465 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 9807CECCC9A326D9

FASTA34737,179
        10         20         30         40         50         60 
MFKYLTPIFL CTAAISFQAQ ADDTMLMLLK KDNATYLSWS TDAGNVVRQD VYRSTSSAQA 

        70         80         90        100        110        120 
GSEKIAELNS SDRTFTDLTA NPQSDYWYWV DTVSGNNSVL KSNAASTAPA PLRAAPLKAA 

       130        140        150        160        170        180 
SPECKAGAVI KDKTVDCGGI TLGLSCSGDS DKQPPVITLE NATIKNLRIS EKGGSDGIHC 

       190        200        210        220        230        240 
KSGNCRIENV IWEDICEDAA TNLGKTMTIV GGVAHNTTNG PGGKPDKVLQ QNAKNSHTIV 

       250        260        270        280        290        300 
QGKFTLTGQH GKLWRSCGDC TNNGGPRNLT IISATVNGTI DSIAGVNRNF GDVAEIRDLR 

       310        320        330        340 
IKGYKEGKPP VCEEFNGVEK GKGKSDKYGE FWDTKNCKVS RSNVKPL

« Hide

References

[1]"Nucleotide sequence and expression of a novel pectate lyase gene (pel-3) and a closely linked endopolygalacturonase gene (peh-1) of Erwinia carotovora subsp. carotovora 71."
Liu Y., Chatterjee A., Chatterjee A.K.
Appl. Environ. Microbiol. 60:2545-2552(1994) [PubMed: 8074530] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 71 EMBL AAA57140.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		L32172 Genomic DNA. Translation: AAA57140.1.

3D structure databases

HSSPHSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ProteinModelPortalQ47465.
SMRQ47465. Positions 24-347.
ModBaseSearch...

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR013783. Ig-like_fold.
IPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
Gene3DG3DSA:2.60.40.10. Ig-like_fold. 1 hit.
G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ47465_ERWCA
AccessionPrimary (citable) accession number: Q47465
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 2, 2010
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info