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Protein

DTW domain-containing protein YfiP

Gene

yfiP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7349-MONOMER.
ECOL316407:JW5409-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DTW domain-containing protein YfiP
Gene namesi
Name:yfiP
Ordered Locus Names:b2583, JW5409
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14223. yfiP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001692711 – 232DTW domain-containing protein YfiPAdd BLAST232

Proteomic databases

PaxDbiQ47319.
PRIDEiQ47319.

Interactioni

Protein-protein interaction databases

BioGridi4261901. 5 interactors.
DIPiDIP-12067N.
IntActiQ47319. 2 interactors.
MINTiMINT-1246472.
STRINGi511145.b2583.

Structurei

3D structure databases

ProteinModelPortaliQ47319.
SMRiQ47319.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi137 – 140DXTW4

Domaini

Contains 1 DXTW motif.

Sequence similaritiesi

Belongs to the DTW family.Curated

Phylogenomic databases

eggNOGiENOG4106IUH. Bacteria.
COG3148. LUCA.
HOGENOMiHOG000278320.
InParanoidiQ47319.
KOiK05812.
OMAiPSNTGWL.
PhylomeDBiQ47319.

Family and domain databases

InterProiIPR005636. DTW.
[Graphical view]
PfamiPF03942. DTW. 1 hit.
[Graphical view]
SMARTiSM01144. DTW. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47319-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENAVLQLR AERIARATRP FLARGNRVRR CQRCLLPEKL CLCSTITPAQ
60 70 80 90 100
AKSRFCLLMF DTEPMKPSNT GRLIADILPD TVAFQWSRTE PSQDLLELVQ
110 120 130 140 150
NPDYQPMVVF PASYADEQRE VIFTPPAGKP PLFIMLDGTW PEARKMFRKS
160 170 180 190 200
PYLDNLPVIS VDLSRLSAYR LREAQAEGQY CTAEVAIALL DMAGDTGAAA
210 220 230
GLGEHFTRFK TRYLAGKTQH LGSITAEQLE SV
Length:232
Mass (Da):25,995
Last modified:December 15, 1998 - v2
Checksum:iC54CDA8CF563050B
GO

Sequence cautioni

The sequence BAA10924 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D64044 Genomic DNA. Translation: BAA10924.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75636.2.
AP009048 Genomic DNA. Translation: BAE76753.1.
PIRiF65036.
RefSeqiNP_417078.4. NC_000913.3.
WP_001300438.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75636; AAC75636; b2583.
BAE76753; BAE76753; BAE76753.
GeneIDi947057.
KEGGiecj:JW5409.
eco:b2583.
PATRICi32120567. VBIEscCol129921_2686.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D64044 Genomic DNA. Translation: BAA10924.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75636.2.
AP009048 Genomic DNA. Translation: BAE76753.1.
PIRiF65036.
RefSeqiNP_417078.4. NC_000913.3.
WP_001300438.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ47319.
SMRiQ47319.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261901. 5 interactors.
DIPiDIP-12067N.
IntActiQ47319. 2 interactors.
MINTiMINT-1246472.
STRINGi511145.b2583.

Proteomic databases

PaxDbiQ47319.
PRIDEiQ47319.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75636; AAC75636; b2583.
BAE76753; BAE76753; BAE76753.
GeneIDi947057.
KEGGiecj:JW5409.
eco:b2583.
PATRICi32120567. VBIEscCol129921_2686.

Organism-specific databases

EchoBASEiEB3975.
EcoGeneiEG14223. yfiP.

Phylogenomic databases

eggNOGiENOG4106IUH. Bacteria.
COG3148. LUCA.
HOGENOMiHOG000278320.
InParanoidiQ47319.
KOiK05812.
OMAiPSNTGWL.
PhylomeDBiQ47319.

Enzyme and pathway databases

BioCyciEcoCyc:G7349-MONOMER.
ECOL316407:JW5409-MONOMER.

Miscellaneous databases

PROiQ47319.

Family and domain databases

InterProiIPR005636. DTW.
[Graphical view]
PfamiPF03942. DTW. 1 hit.
[Graphical view]
SMARTiSM01144. DTW. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFIP_ECOLI
AccessioniPrimary (citable) accession number: Q47319
Secondary accession number(s): Q2MAF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 15, 1998
Last modified: November 2, 2016
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.