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Protein

Uncharacterized protein YlcG

Gene

ylcG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2657.
ECOL316407:JW5076-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YlcG
Gene namesi
Name:ylcG
Ordered Locus Names:b4509, JW5076
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14354. ylcG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 4646Uncharacterized protein YlcGPRO_0000168657Add
BLAST

Proteomic databases

EPDiQ47272.
PaxDbiQ47272.
PRIDEiQ47272.

Expressioni

Inductioni

Expressed during stationary phase (at protein level).1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4263291. 134 interactions.
STRINGi511145.b4509.

Structurei

3D structure databases

ProteinModelPortaliQ47272.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To equivalent protein in phage 82.Curated

Phylogenomic databases

HOGENOMiHOG000009382.
OrthoDBiEOG6KQ6ND.

Sequencei

Sequence statusi: Complete.

Q47272-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MMFEFNMAEL LRHRWGRLRL YRFPGSVLTD YRILKNYAKT LTGAGV
Length:46
Mass (Da):5,494
Last modified:November 1, 1996 - v1
Checksum:iE5D339EBC756A26E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X92587 Genomic DNA. Translation: CAA63322.1.
U00096 Genomic DNA. Translation: ABD18639.1.
AP009048 Genomic DNA. Translation: BAE76326.1.
PIRiS66591.
RefSeqiWP_000971055.1. NZ_LN832404.1.
YP_588439.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABD18639; ABD18639; b4509.
BAE76326; BAE76326; BAE76326.
GeneIDi1450240.
KEGGiecj:JW5076.
eco:b4509.
PATRICi32116264. VBIEscCol129921_0572.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X92587 Genomic DNA. Translation: CAA63322.1.
U00096 Genomic DNA. Translation: ABD18639.1.
AP009048 Genomic DNA. Translation: BAE76326.1.
PIRiS66591.
RefSeqiWP_000971055.1. NZ_LN832404.1.
YP_588439.1. NC_000913.3.

3D structure databases

ProteinModelPortaliQ47272.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263291. 134 interactions.
STRINGi511145.b4509.

Proteomic databases

EPDiQ47272.
PaxDbiQ47272.
PRIDEiQ47272.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD18639; ABD18639; b4509.
BAE76326; BAE76326; BAE76326.
GeneIDi1450240.
KEGGiecj:JW5076.
eco:b4509.
PATRICi32116264. VBIEscCol129921_0572.

Organism-specific databases

EcoGeneiEG14354. ylcG.

Phylogenomic databases

HOGENOMiHOG000009382.
OrthoDBiEOG6KQ6ND.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2657.
ECOL316407:JW5076-MONOMER.

Miscellaneous databases

PROiQ47272.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82."
    Mahdi A.A., Sharples G.J., Mandal T.N., Lloyd R.G.
    J. Mol. Biol. 257:561-573(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Small membrane proteins found by comparative genomics and ribosome binding site models."
    Hemm M.R., Paul B.J., Schneider T.D., Storz G., Rudd K.E.
    Mol. Microbiol. 70:1487-1501(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION.
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYLCG_ECOLI
AccessioniPrimary (citable) accession number: Q47272
Secondary accession number(s): Q2EEQ4, Q2MBN0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.