Q47270 (NINE_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein NinE homolog from lambdoid prophage DLP12

Gene names

Name:	ninE
Ordered Locus Names:	b0548, JW0536

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	56 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Miscellaneous	Encoded by the cryptic lambdoid prophage DLP12.
Sequence similarities	Belongs to the ninE family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 56	56	Protein NinE homolog from lambdoid prophage DLP12		PRO_0000077621

Sequences

	Sequence		Length	Mass (Da)
	Q47270 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: BBF374F7ADC3CEFB	FASTA	56	6,494
	10 20 30 40 50 MATPLIRVMN GHIYRVPNRR KRKPELKPSE IPTLLGYTAS LVDKKWLRLA ARRSHG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82." Mahdi A.A., Sharples G.J., Mandal T.N., Lloyd R.G. J. Mol. Biol. 257:561-573(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[2]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[3]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X92587 Genomic DNA. Translation: CAA63319.1. U00096 Genomic DNA. Translation: AAC73649.1. AP009048 Genomic DNA. Translation: BAE76323.1.
PIR	S66588.
RefSeq	NP_415080.1. NC_000913.2. YP_488835.1. NC_007779.1.
3D structure databases
ProteinModelPortal	Q47270.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q47270. 3 interactions.
STRING	511145.b0548.
Proteomic databases
PRIDE	Q47270.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC73649; AAC73649; b0548. BAE76323; BAE76323; BAE76323.
GeneID	12930883. 945151.
KEGG	ecj:Y75_p0533. eco:b0548.
Organism-specific databases
EchoBASE	EB4034.
EcoGene	EG14286. ninE.
Phylogenomic databases
eggNOG	NOG283836.
HOGENOM	HOG000054897.
OMA	ARVITNE.
ProtClustDB	PRK09689.
Enzyme and pathway databases
BioCyc	EcoCyc:G6304-MONOMER. ECOL316407:JW0536-MONOMER.
Gene expression databases
Genevestigator	Q47270.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

NINE_ECOLI

Accession

Primary (citable) accession number: Q47270
Secondary accession number(s): Q2MBN3

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 15, 1998
Last sequence update:	November 1, 1996
Last modified:	May 1, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program