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Protein

Uncharacterized protein YbcN

Gene

ybcN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

GO - Molecular functioni

  • bubble DNA binding Source: EcoCyc
  • single-stranded DNA binding Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6303-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbcN
Gene namesi
Name:ybcN
Ordered Locus Names:b0547, JW0535
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13630 ybcN

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686521 – 151Uncharacterized protein YbcNAdd BLAST151

Proteomic databases

PaxDbiQ47269
PRIDEiQ47269

Interactioni

Protein-protein interaction databases

BioGridi4259876, 281 interactors
IntActiQ47269, 7 interactors
STRINGi316385.ECDH10B_0503

Structurei

3D structure databases

ProteinModelPortaliQ47269
SMRiQ47269
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To equivalent protein in phage 82.Curated

Phylogenomic databases

eggNOGiENOG4108V2F Bacteria
ENOG4111N1P LUCA
HOGENOMiHOG000267847
OMAiGEMYIFL

Family and domain databases

Gene3Di1.10.3790.10, 1 hit
InterProiView protein in InterPro
IPR036619 NinB_sf
SUPFAMiSSF103370 SSF103370, 1 hit

Sequencei

Sequence statusi: Complete.

Q47269-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLSQDGIKL HRGNFTAIGR QIQPYLEEGK CFRMVLKPWR EKRSLSQNAL
60 70 80 90 100
SHMWYSEISE YLISRGKTFA TPAWVKDALK HTYLGYETKD LVDVVTGDIT
110 120 130 140 150
TIQSLRHTSD LDTGEMYVFL CKVEAWAMNI GCHLTIPQSC EFQLLRDKQE

A
Length:151
Mass (Da):17,433
Last modified:November 1, 1996 - v1
Checksum:iA09FFFBBE24D91B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X92587 Genomic DNA Translation: CAA63318.1
U82598 Genomic DNA Translation: AAB40744.1
U00096 Genomic DNA Translation: AAC73648.1
AP009048 Genomic DNA Translation: BAE76322.1
PIRiS66587
RefSeqiNP_415079.1, NC_000913.3
WP_001054340.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73648; AAC73648; b0547
BAE76322; BAE76322; BAE76322
GeneIDi945162
KEGGiecj:JW0535
eco:b0547
PATRICifig|511145.12.peg.569

Similar proteinsi

Entry informationi

Entry nameiYBCN_ECOLI
AccessioniPrimary (citable) accession number: Q47269
Secondary accession number(s): Q2MBN4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health