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Protein

Uncharacterized protein YlcH

Gene

ylcH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2813.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YlcH
Gene namesi
Name:ylcH
Ordered Locus Names:b4588
ORF Names:b0546.1
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14355. ylcH.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 3333Uncharacterized protein YlcHPRO_0000168659Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriQ47268.

Interactioni

Protein-protein interaction databases

STRINGi511145.b4588.

Structurei

3D structure databases

ProteinModelPortaliQ47268.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To equivalent protein in phage 82.Curated

Phylogenomic databases

OrthoDBiEOG6ZH2QJ.

Sequencei

Sequence statusi: Complete.

Q47268-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30 
MRTYNPNSLL PSQMQKCTCN SLHLAFDLCG GEA
Length:33
Mass (Da):3,644
Last modified:October 31, 1996 - v1
Checksum:iF1FE35B20E35F939
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X92587 Genomic DNA. Translation: CAA63317.1.
U00096 Genomic DNA. Translation: ABP93435.1.
PIRiS66586.
RefSeqiYP_001165308.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABP93435; ABP93435; b4588.
GeneIDi5061504.
KEGGieco:b4588.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X92587 Genomic DNA. Translation: CAA63317.1.
U00096 Genomic DNA. Translation: ABP93435.1.
PIRiS66586.
RefSeqiYP_001165308.1. NC_000913.3.

3D structure databases

ProteinModelPortaliQ47268.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4588.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABP93435; ABP93435; b4588.
GeneIDi5061504.
KEGGieco:b4588.

Organism-specific databases

EcoGeneiEG14355. ylcH.

Phylogenomic databases

OrthoDBiEOG6ZH2QJ.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2813.

Gene expression databases

GenevestigatoriQ47268.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82."
    Mahdi A.A., Sharples G.J., Mandal T.N., Lloyd R.G.
    J. Mol. Biol. 257:561-573(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYLCH_ECOLI
AccessioniPrimary (citable) accession number: Q47268
Secondary accession number(s): A5A606
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 30, 2000
Last sequence update: October 31, 1996
Last modified: January 6, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.