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Q47268 (YLCH_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YlcH
Gene names
Name:ylcH
Ordered Locus Names:b4588
ORF Names:b0546.1
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length33 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Sequence similarities

To equivalent protein in phage 82.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 3333Uncharacterized protein YlcH
PRO_0000168659

Sequences

Sequence LengthMass (Da)Tools
Q47268 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: F1FE35B20E35F939

FASTA333,644
        10         20         30 
MRTYNPNSLL PSQMQKCTCN SLHLAFDLCG GEA 

« Hide

References

« Hide 'large scale' references
[1]"Holliday junction resolvases encoded by homologous rusA genes in Escherichia coli K-12 and phage 82."
Mahdi A.A., Sharples G.J., Mandal T.N., Lloyd R.G.
J. Mol. Biol. 257:561-573(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X92587 Genomic DNA. Translation: CAA63317.1.
U00096 Genomic DNA. Translation: ABP93435.1.
PIRS66586.
RefSeqYP_001165308.1. NC_000913.3.

3D structure databases

ProteinModelPortalQ47268.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING511145.b4588.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABP93435; ABP93435; b4588.
GeneID5061504.
KEGGeco:b4588.

Organism-specific databases

EcoGeneEG14355. ylcH.

Phylogenomic databases

OrthoDBEOG6ZH2QJ.

Enzyme and pathway databases

BioCycEcoCyc:MONOMER0-2813.

Gene expression databases

GenevestigatorQ47268.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameYLCH_ECOLI
AccessionPrimary (citable) accession number: Q47268
Secondary accession number(s): A5A606
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene