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Protein

Putative truncated flagellar export/assembly protein LafU

Gene

lafU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6114-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative truncated flagellar export/assembly protein LafUCurated
Gene namesi
Name:lafU1 Publication
Synonyms:mbhA1 Publication
Ordered Locus Names:b0230, JW5812
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13143. lafU.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 211211Putative truncated flagellar export/assembly protein LafUPRO_0000196258Add
BLAST

Proteomic databases

PRIDEiQ47154.

Interactioni

Protein-protein interaction databases

IntActiQ47154. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ47154.
SMRiQ47154. Positions 30-181.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini58 – 176119OmpA-likePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the MotB family.Curated
Contains 1 OmpA-like domain.PROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000254689.
InParanoidiQ47154.

Family and domain databases

CDDicd07185. OmpA_C-like. 1 hit.
Gene3Di3.30.1330.60. 1 hit.
InterProiIPR006665. OmpA-like.
[Graphical view]
PfamiPF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS51123. OMPA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q47154-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVPEETEKK ARDVNEKTAL LKKKSATELG ELATSINTIA RDAHMEANLE
60 70 80 90 100
MEIVPQGLRV LIKDDQNRNM FERGSAKIMP FFKTLLVELA PVFDSLDNKI
110 120 130 140 150
IITGHTDAMA YKNNIYNNWN LSGDRALSAR RVLEEAGMPE DKVMQVSAMA
160 170 180 190 200
DQMLLDSKNP QSAGNRRIEI MVLTKSASDT LYQYFGQHGD KVVQPLVQKL
210
DKQQVLSQRT R
Length:211
Mass (Da):23,779
Last modified:November 1, 1997 - v1
Checksum:i12A4CA1420B2B1AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38582 Genomic DNA. Translation: BAA07592.1.
U70214 Genomic DNA. Translation: AAB08650.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiG64747.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38582 Genomic DNA. Translation: BAA07592.1.
U70214 Genomic DNA. Translation: AAB08650.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiG64747.

3D structure databases

ProteinModelPortaliQ47154.
SMRiQ47154. Positions 30-181.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ47154. 2 interactions.

Proteomic databases

PRIDEiQ47154.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB2937.
EcoGeneiEG13143. lafU.

Phylogenomic databases

HOGENOMiHOG000254689.
InParanoidiQ47154.

Enzyme and pathway databases

BioCyciEcoCyc:G6114-MONOMER.

Family and domain databases

CDDicd07185. OmpA_C-like. 1 hit.
Gene3Di3.30.1330.60. 1 hit.
InterProiIPR006665. OmpA-like.
[Graphical view]
PfamiPF00691. OmpA. 1 hit.
[Graphical view]
SUPFAMiSSF103088. SSF103088. 1 hit.
PROSITEiPS51123. OMPA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiLAFU_ECOLI
AccessioniPrimary (citable) accession number: Q47154
Secondary accession number(s): P75674, Q47682
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. Promoterless gene that is a remnant of an ancestral flagellar gene cluster, Flag-2. The N-terminus is shorter than in orthologs.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.