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Protein

Putative truncated flagellar export/assembly protein LfhA

Gene

lfhA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Could be the product of a pseudogene. Promoterless gene that is a remnant of an ancestral flagellar gene cluster, Flag-2. The N-terminus is shorter than in orthologs.1 Publication

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:G6113-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative truncated flagellar export/assembly protein LfhACurated
Gene namesi
Name:lfhA1 Publication
Synonyms:fhiA1 Publication
Ordered Locus Names:b0229, JW5811
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13144 lfhA

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei86 – 106HelicalSequence analysisAdd BLAST21
Transmembranei124 – 144HelicalSequence analysisAdd BLAST21
Transmembranei177 – 197HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001900081 – 579Putative truncated flagellar export/assembly protein LfhAAdd BLAST579

Proteomic databases

PRIDEiQ47153

Interactioni

Protein-protein interaction databases

DIPiDIP-9600N
IntActiQ47153, 6 interactors

Structurei

3D structure databases

ProteinModelPortaliQ47153
SMRiQ47153
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000254014
InParanoidiQ47153
OMAiWDLAFHQ

Family and domain databases

InterProiView protein in InterPro
IPR025505 FHIPEP_CS
IPR001712 T3SS_FHIPEP
PANTHERiPTHR30161 PTHR30161, 1 hit
PfamiView protein in Pfam
PF00771 FHIPEP, 1 hit
PRINTSiPR00949 TYPE3IMAPROT
PROSITEiView protein in PROSITE
PS00994 FHIPEP, 1 hit

Sequencei

Sequence statusi: Complete.

Q47153-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSRSDLLTL LTINFIVVTK GAERISEVSA RFTLDAMPGK QMAIDADLNA
60 70 80 90 100
GLINQAQAQT RRKDVASEAD FYGAMDGASK FVRGDAIAGM MILAINLIGG
110 120 130 140 150
VCIGIFKYNL SADAAFQQYV LMTIGDGLVA QIPSLLLSTA AAIIVTRVSD
160 170 180 190 200
NGDIAHDVRN QLLASPSVLY TATGIMFVLA VVPGMPHLPF LLFSALLGFT
210 220 230 240 250
GWRMSKQPLA AEAEEKSLET LTRTITETSE QQVSWETIPL IEPISLSLGY
260 270 280 290 300
KLVALVDKAQ GNPLTQRIRG VRQVISDGNG VLLPEIRIRE NFRLKPSQYA
310 320 330 340 350
IFINGIKADE ADIPADKLMA LPSSETYGEI DGVQGNDPAY GMPVTWIQAA
360 370 380 390 400
QKAKALNMGY QVIDSASVIA THVNKIVRSY IPDLFNYDDI TQLHNRLSST
410 420 430 440 450
APRLAEDLSA ALNYSQLLKV YRALLTEGVS LRDIVTIATV LVASSTVTKD
460 470 480 490 500
HILLAADVRL ALRRSITHPF VRKQELTVYT LNNELENLLT NVVNQAQQGG
510 520 530 540 550
KVMLDSVPVD PNMLNQFQST MPQVKEQMKA AGKDPVLLVP PQLRPLLARY
560 570
ARLFAPGLHV LSYNEVPDEL ELKIMGALM
Length:579
Mass (Da):63,153
Last modified:November 1, 1997 - v1
Checksum:iC55FFA76C79F2149
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38582 Genomic DNA Translation: BAA07591.1
U70214 Genomic DNA Translation: AAB08649.1
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA No translation available.
PIRiF64747
RefSeqiWP_001334802.1, NZ_LN832404.1

Genome annotation databases

PATRICifig|83333.103.peg.980

Similar proteinsi

Entry informationi

Entry nameiLFHA_ECOLI
AccessioniPrimary (citable) accession number: Q47153
Secondary accession number(s): Q47681
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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