Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative glutamine amidotransferase YafJ

Gene

yafJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei2 – 21For GATase activityBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Enzyme and pathway databases

BioCyciEcoCyc:G6107-MONOMER.
ECOL316407:JW0213-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative glutamine amidotransferase YafJ (EC:2.4.2.-)
Gene namesi
Name:yafJ
Ordered Locus Names:b0223, JW0213
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13147. yafJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 255254Putative glutamine amidotransferase YafJPRO_0000168534Add
BLAST

Proteomic databases

PaxDbiQ47147.
PRIDEiQ47147.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
bioBP129964EBI-1114805,EBI-557917

Protein-protein interaction databases

BioGridi4260847. 12 interactions.
IntActiQ47147. 14 interactions.
STRINGi511145.b0223.

Structurei

3D structure databases

ProteinModelPortaliQ47147.
SMRiQ47147. Positions 2-252.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 251250Glutamine amidotransferase type-2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 glutamine amidotransferase type-2 domain.PROSITE-ProRule annotation

Keywords - Domaini

Glutamine amidotransferase

Phylogenomic databases

eggNOGiENOG4105E7A. Bacteria.
COG0121. LUCA.
HOGENOMiHOG000256248.
InParanoidiQ47147.
OMAiYWVFAHN.
PhylomeDBiQ47147.

Family and domain databases

Gene3Di3.60.20.10. 1 hit.
InterProiIPR017932. GATase_2_dom.
IPR029055. Ntn_hydrolases_N.
IPR026869. Put_GATase_2.
[Graphical view]
PfamiPF13230. GATase_4. 1 hit.
[Graphical view]
SUPFAMiSSF56235. SSF56235. 1 hit.
PROSITEiPS51278. GATASE_TYPE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q47147-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCELLGMSAN VPTDICFSFT GLVQRGGGTG PHKDGWGITF YEGKGCRTFK
60 70 80 90 100
DPQPSFNSPI AKLVQDYPIK SCSVVAHIRQ ANRGEVALEN THPFTRELWG
110 120 130 140 150
RNWTYAHNGQ LTGYKSLETG NFRPVGETDS EKAFCWLLHK LTQRYPRTPG
160 170 180 190 200
NMAAVFKYIA SLADELRQKG VFNMLLSDGR YVMAYCSTNL HWITRRAPFG
210 220 230 240 250
VATLLDQDVE IDFSSQTTPN DVVTVIATQP LTGNETWQKI MPGEWRLFCL

GERVV
Length:255
Mass (Da):28,636
Last modified:November 1, 1997 - v1
Checksum:iEEC155D4B833A0A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38582 Genomic DNA. Translation: BAA07585.1.
U70214 Genomic DNA. Translation: AAB08645.1.
U00096 Genomic DNA. Translation: AAC73327.1.
AP009048 Genomic DNA. Translation: BAA77893.1.
PIRiH64746.
RefSeqiNP_414758.1. NC_000913.3.
WP_000333380.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73327; AAC73327; b0223.
BAA77893; BAA77893; BAA77893.
GeneIDi944906.
KEGGiecj:JW0213.
eco:b0223.
PATRICi32115561. VBIEscCol129921_0225.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38582 Genomic DNA. Translation: BAA07585.1.
U70214 Genomic DNA. Translation: AAB08645.1.
U00096 Genomic DNA. Translation: AAC73327.1.
AP009048 Genomic DNA. Translation: BAA77893.1.
PIRiH64746.
RefSeqiNP_414758.1. NC_000913.3.
WP_000333380.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ47147.
SMRiQ47147. Positions 2-252.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260847. 12 interactions.
IntActiQ47147. 14 interactions.
STRINGi511145.b0223.

Proteomic databases

PaxDbiQ47147.
PRIDEiQ47147.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73327; AAC73327; b0223.
BAA77893; BAA77893; BAA77893.
GeneIDi944906.
KEGGiecj:JW0213.
eco:b0223.
PATRICi32115561. VBIEscCol129921_0225.

Organism-specific databases

EchoBASEiEB2941.
EcoGeneiEG13147. yafJ.

Phylogenomic databases

eggNOGiENOG4105E7A. Bacteria.
COG0121. LUCA.
HOGENOMiHOG000256248.
InParanoidiQ47147.
OMAiYWVFAHN.
PhylomeDBiQ47147.

Enzyme and pathway databases

BioCyciEcoCyc:G6107-MONOMER.
ECOL316407:JW0213-MONOMER.

Miscellaneous databases

PROiQ47147.

Family and domain databases

Gene3Di3.60.20.10. 1 hit.
InterProiIPR017932. GATase_2_dom.
IPR029055. Ntn_hydrolases_N.
IPR026869. Put_GATase_2.
[Graphical view]
PfamiPF13230. GATase_4. 1 hit.
[Graphical view]
SUPFAMiSSF56235. SSF56235. 1 hit.
PROSITEiPS51278. GATASE_TYPE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYAFJ_ECOLI
AccessioniPrimary (citable) accession number: Q47147
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 7, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.