Skip Header

 
Contribute Send feedback

Unreviewed, UniProtKB/TrEMBL Q47088 (Q47088_ECOLX)

Last modified July 22, 2008. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    CdtA (Cytolethal distending toxin A) EMBL AAD10621.1
Gene names
Name: cdtA EMBL AAD10621.1
OrganismEscherichia coli EMBL AAD10621.1
Taxonomic identifier562 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Gene Ontology (GO)

   Biological processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell outer membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q47088-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 6D7EC323E4968E4E

FASTA23725,596
        10         20         30         40         50         60 
MDKKLIAFLC TLIITGCSNG IGDSPSPPGK NVELVGIPGQ GIAVTSNGAT PTLGANNTEF 

        70         80         90        100        110        120 
PEVSIMSTGG ALLTIWARPV RNWLWGYTPF DSVNFGENRN WKVVDGKDAG TVKFVNVAQG 

       130        140        150        160        170        180 
TCMEAFKNGV IHNTCDDNSL SQEFQLLPST NGNVLIRSSA LQTCIRADYL SRTILSPFAF 

       190        200        210        220        230 
TITLEKCPGA KEETQEMLWA ISPPVRAAKP NLIKPELRPF RPLPIPPHDK PDGMEGV 

« Hide

References

[1]"Cloning and sequencing of the genes encoding Escherichia coli cytolethal distending toxin."
Scott D.A., Kaper J.B.
Infect. Immun. 62:244-251(1994) [PubMed: 8262635] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: E6468/62 EMBL AAD10621.1.
[2]"Cytolethal distending toxin (Cdt)-producing escherichia coli isolated from a child with bloody diarrhea in Japan."
Hinenoya A., Nagita A., Asakura M., Tsukamoto T., Ramamurthy T., Nair G.B., Takeda Y., Yamasaki S.
Microbiol. Immunol. 51:435-438(2007) [PubMed: 17446683] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 552 EMBL BAF36042.2.

Cross-references

Sequence databases

U03293 Genomic DNA. Translation: AAD10621.1.
AB258385 Genomic DNA. Translation: BAF36042.2.

3D structure databases

ModBaseSearch...

Family and domain databases

InterProIPR015957. CDtoxinA.
IPR003558. CDtoxinA/C.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF03498. CDtoxinA. 1 hit.
[Graphical view]
PIRSFPIRSF036516. CDT_A. 1 hit.
PRINTSPR01387. CDTOXINA.
PROSITEPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Entry information

Entry nameQ47088_ECOLX
AccessionPrimary (citable) accession number: Q47088
Secondary accession number(s): A0A8W5
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 22, 2008
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information