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Q46XK7 (RS20_CUPPJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S20
Gene names
Name:rpsT
Ordered Locus Names:Reut_A2765
OrganismCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134)) [Complete proteome] [HAMAP]
Taxonomic identifier264198 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length88 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00500

Sequence similarities

Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 888830S ribosomal protein S20 HAMAP-Rule MF_00500
PRO_0000224983

Sequences

Sequence LengthMass (Da)Tools
Q46XK7 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 4E60D21CA4D4A2C7

FASTA889,404
        10         20         30         40         50         60 
MANSAQARKR ARQAVAQNAH NSSLRSRLRT AVKAVRKAID AGDKAAAAEI FKNSQATIDS 

        70         80 
IADKKIVHKN KAARHKSRLS AAIKAMAA 

« Hide

References

[1]"Complete sequence of chromosome 1 of Ralstonia eutropha JMP134."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JMP134 / LMG 1197.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000090 Genomic DNA. Translation: AAZ62126.1.
RefSeqYP_296970.1. NC_007347.1.

3D structure databases

ProteinModelPortalQ46XK7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING264198.Reut_A2765.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ62126; AAZ62126; Reut_A2765.
GeneID3612335.
KEGGreu:Reut_A2765.
PATRIC20231208. VBIRalEut24049_3437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0268.
HOGENOMHOG000097048.
KOK02968.
OMAAQEAFII.
OrthoDBEOG6HMXNQ.

Enzyme and pathway databases

BioCycCPIN264198:GIW3-2812-MONOMER.

Family and domain databases

Gene3D1.20.58.110. 1 hit.
HAMAPMF_00500. Ribosomal_S20.
InterProIPR002583. Ribosomal_S20.
[Graphical view]
PfamPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF46992. SSF46992. 1 hit.
TIGRFAMsTIGR00029. S20. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS20_CUPPJ
AccessionPrimary (citable) accession number: Q46XK7
Entry history
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: September 13, 2005
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries