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Q46XK7

- RS20_CUPPJ

UniProt

Q46XK7 - RS20_CUPPJ

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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciCPIN264198:GIW3-2812-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:Reut_A2765
OrganismiCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Taxonomic identifieri264198 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000002697: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 888830S ribosomal protein S20PRO_0000224983Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi264198.Reut_A2765.

Structurei

3D structure databases

ProteinModelPortaliQ46XK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S20P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0268.
HOGENOMiHOG000097048.
KOiK02968.
OMAiAQEAFII.
OrthoDBiEOG6HMXNQ.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46XK7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MANSAQARKR ARQAVAQNAH NSSLRSRLRT AVKAVRKAID AGDKAAAAEI
60 70 80
FKNSQATIDS IADKKIVHKN KAARHKSRLS AAIKAMAA
Length:88
Mass (Da):9,404
Last modified:September 13, 2005 - v1
Checksum:i4E60D21CA4D4A2C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000090 Genomic DNA. Translation: AAZ62126.1.
RefSeqiWP_011298911.1. NC_007347.1.
YP_296970.1. NC_007347.1.

Genome annotation databases

EnsemblBacteriaiAAZ62126; AAZ62126; Reut_A2765.
GeneIDi3612335.
KEGGireu:Reut_A2765.
PATRICi20231208. VBIRalEut24049_3437.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000090 Genomic DNA. Translation: AAZ62126.1 .
RefSeqi WP_011298911.1. NC_007347.1.
YP_296970.1. NC_007347.1.

3D structure databases

ProteinModelPortali Q46XK7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 264198.Reut_A2765.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAZ62126 ; AAZ62126 ; Reut_A2765 .
GeneIDi 3612335.
KEGGi reu:Reut_A2765.
PATRICi 20231208. VBIRalEut24049_3437.

Phylogenomic databases

eggNOGi COG0268.
HOGENOMi HOG000097048.
KOi K02968.
OMAi AQEAFII.
OrthoDBi EOG6HMXNQ.

Enzyme and pathway databases

BioCyci CPIN264198:GIW3-2812-MONOMER.

Family and domain databases

Gene3Di 1.20.58.110. 1 hit.
HAMAPi MF_00500. Ribosomal_S20.
InterProi IPR002583. Ribosomal_S20.
[Graphical view ]
Pfami PF01649. Ribosomal_S20p. 1 hit.
[Graphical view ]
ProDomi PD004231. Ribosomal_S20. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF46992. SSF46992. 1 hit.
TIGRFAMsi TIGR00029. S20. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Ralstonia eutropha JMP134."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JMP134 / LMG 1197.

Entry informationi

Entry nameiRS20_CUPPJ
AccessioniPrimary (citable) accession number: Q46XK7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: September 13, 2005
Last modified: November 26, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3