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Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciCPIN264198:GIW3-2812-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:Reut_A2765
OrganismiCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Taxonomic identifieri264198 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000002697 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 888830S ribosomal protein S20PRO_0000224983Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi264198.Reut_A2765.

Structurei

3D structure databases

ProteinModelPortaliQ46XK7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S20P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0268.
HOGENOMiHOG000097048.
KOiK02968.
OMAiNAHNSSL.
OrthoDBiEOG6HMXNQ.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46XK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANSAQARKR ARQAVAQNAH NSSLRSRLRT AVKAVRKAID AGDKAAAAEI
60 70 80
FKNSQATIDS IADKKIVHKN KAARHKSRLS AAIKAMAA
Length:88
Mass (Da):9,404
Last modified:September 13, 2005 - v1
Checksum:i4E60D21CA4D4A2C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000090 Genomic DNA. Translation: AAZ62126.1.
RefSeqiWP_011298911.1. NC_007347.1.
YP_296970.1. NC_007347.1.

Genome annotation databases

EnsemblBacteriaiAAZ62126; AAZ62126; Reut_A2765.
KEGGireu:Reut_A2765.
PATRICi20231208. VBIRalEut24049_3437.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000090 Genomic DNA. Translation: AAZ62126.1.
RefSeqiWP_011298911.1. NC_007347.1.
YP_296970.1. NC_007347.1.

3D structure databases

ProteinModelPortaliQ46XK7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264198.Reut_A2765.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ62126; AAZ62126; Reut_A2765.
KEGGireu:Reut_A2765.
PATRICi20231208. VBIRalEut24049_3437.

Phylogenomic databases

eggNOGiCOG0268.
HOGENOMiHOG000097048.
KOiK02968.
OMAiNAHNSSL.
OrthoDBiEOG6HMXNQ.

Enzyme and pathway databases

BioCyciCPIN264198:GIW3-2812-MONOMER.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Ralstonia eutropha JMP134."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JMP134 / LMG 1197.

Entry informationi

Entry nameiRS20_CUPPJ
AccessioniPrimary (citable) accession number: Q46XK7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: September 13, 2005
Last modified: May 27, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.