Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q46XK7

- RS20_CUPPJ

UniProt

Q46XK7 - RS20_CUPPJ

Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds directly to 16S ribosomal RNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciCPIN264198:GIW3-2812-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S20UniRule annotation
    Gene namesi
    Name:rpsTUniRule annotation
    Ordered Locus Names:Reut_A2765
    OrganismiCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
    Taxonomic identifieri264198 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
    ProteomesiUP000002697: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 888830S ribosomal protein S20PRO_0000224983Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi264198.Reut_A2765.

    Structurei

    3D structure databases

    ProteinModelPortaliQ46XK7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S20P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0268.
    HOGENOMiHOG000097048.
    KOiK02968.
    OMAiAQEAFII.
    OrthoDBiEOG6HMXNQ.

    Family and domain databases

    Gene3Di1.20.58.110. 1 hit.
    HAMAPiMF_00500. Ribosomal_S20.
    InterProiIPR002583. Ribosomal_S20.
    [Graphical view]
    PfamiPF01649. Ribosomal_S20p. 1 hit.
    [Graphical view]
    ProDomiPD004231. Ribosomal_S20. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46992. SSF46992. 1 hit.
    TIGRFAMsiTIGR00029. S20. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q46XK7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANSAQARKR ARQAVAQNAH NSSLRSRLRT AVKAVRKAID AGDKAAAAEI   50
    FKNSQATIDS IADKKIVHKN KAARHKSRLS AAIKAMAA 88
    Length:88
    Mass (Da):9,404
    Last modified:September 13, 2005 - v1
    Checksum:i4E60D21CA4D4A2C7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000090 Genomic DNA. Translation: AAZ62126.1.
    RefSeqiWP_011298911.1. NC_007347.1.
    YP_296970.1. NC_007347.1.

    Genome annotation databases

    EnsemblBacteriaiAAZ62126; AAZ62126; Reut_A2765.
    GeneIDi3612335.
    KEGGireu:Reut_A2765.
    PATRICi20231208. VBIRalEut24049_3437.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000090 Genomic DNA. Translation: AAZ62126.1 .
    RefSeqi WP_011298911.1. NC_007347.1.
    YP_296970.1. NC_007347.1.

    3D structure databases

    ProteinModelPortali Q46XK7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 264198.Reut_A2765.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAZ62126 ; AAZ62126 ; Reut_A2765 .
    GeneIDi 3612335.
    KEGGi reu:Reut_A2765.
    PATRICi 20231208. VBIRalEut24049_3437.

    Phylogenomic databases

    eggNOGi COG0268.
    HOGENOMi HOG000097048.
    KOi K02968.
    OMAi AQEAFII.
    OrthoDBi EOG6HMXNQ.

    Enzyme and pathway databases

    BioCyci CPIN264198:GIW3-2812-MONOMER.

    Family and domain databases

    Gene3Di 1.20.58.110. 1 hit.
    HAMAPi MF_00500. Ribosomal_S20.
    InterProi IPR002583. Ribosomal_S20.
    [Graphical view ]
    Pfami PF01649. Ribosomal_S20p. 1 hit.
    [Graphical view ]
    ProDomi PD004231. Ribosomal_S20. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46992. SSF46992. 1 hit.
    TIGRFAMsi TIGR00029. S20. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Ralstonia eutropha JMP134."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
      Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JMP134 / LMG 1197.

    Entry informationi

    Entry nameiRS20_CUPPJ
    AccessioniPrimary (citable) accession number: Q46XK7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 7, 2006
    Last sequence update: September 13, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3