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Protein
Submitted name:

Putative DNA-binding protein

Gene

Reut_B4095

Organism
Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingImported

Enzyme and pathway databases

BioCyciCPIN264198:GIW3-4171-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA-binding proteinImported
Gene namesi
Ordered Locus Names:Reut_B4095Imported
OrganismiCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134))Imported
Taxonomic identifieri264198 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
Proteomesi
  • UP000002697 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi264198.Reut_B4095.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OBPX-ray1.70A/B1-95[»]
ProteinModelPortaliQ46TT3.
SMRiQ46TT3. Positions 12-92.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ46TT3.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4106FQ4. Bacteria.
ENOG410Y7DI. LUCA.
HOGENOMiHOG000199288.
OMAiEGRAVCA.
OrthoDBiEOG6D8BGG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011991. WHTH_DNA-bd_dom.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46TT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDPGNEQNG DGIDPAIVEV LLVLREAGIE NGATPWSLPK IAKRAQLPMS
60 70 80 90
VLRRVLTQLQ AAGLADVSVE ADGRGHASLT QEGAALAAQL FPDPF
Length:95
Mass (Da):9,943
Last modified:September 13, 2005 - v1
Checksum:i432509FECB8A26FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000091 Genomic DNA. Translation: AAZ63451.1.
RefSeqiWP_011300217.1. NC_007348.1.

Genome annotation databases

EnsemblBacteriaiAAZ63451; AAZ63451; Reut_B4095.
KEGGireu:Reut_B4095.
PATRICi20234029. VBIRalEut24049_4816.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000091 Genomic DNA. Translation: AAZ63451.1.
RefSeqiWP_011300217.1. NC_007348.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OBPX-ray1.70A/B1-95[»]
ProteinModelPortaliQ46TT3.
SMRiQ46TT3. Positions 12-92.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264198.Reut_B4095.

Protocols and materials databases

DNASUi3614580.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ63451; AAZ63451; Reut_B4095.
KEGGireu:Reut_B4095.
PATRICi20234029. VBIRalEut24049_4816.

Phylogenomic databases

eggNOGiENOG4106FQ4. Bacteria.
ENOG410Y7DI. LUCA.
HOGENOMiHOG000199288.
OMAiEGRAVCA.
OrthoDBiEOG6D8BGG.

Enzyme and pathway databases

BioCyciCPIN264198:GIW3-4171-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ46TT3.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011991. WHTH_DNA-bd_dom.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of chromosome 2 of Ralstonia eutropha JMP134."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JMP134 / LMG 1197Imported.
  2. "Crystal structure of putative DNA-binding protein (YP_298295.1) from Ralstonia eutropha JMP134 at 1.70 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (DEC-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS).

Entry informationi

Entry nameiQ46TT3_CUPPJ
AccessioniPrimary (citable) accession number: Q46TT3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: March 16, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.