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Q46R07 (Q46R07_CUPPJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Reut_B5079 EMBL AAZ64427.1
OrganismCupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134)) [Complete proteome] [HAMAP] EMBL AAZ64427.1
Taxonomic identifier264198 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus

Protein attributes

Sequence length901 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AAZ64427.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q46R07 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 250BDFD8F1B2E563

FASTA90198,871
        10         20         30         40         50         60 
MAKTTRQTPD DTRGTRSTRT AEPARKRPAD ALGKYRQMRD FAATPEPGGT RQRARATPKA 

        70         80         90        100        110        120 
KRAGTLSFVI QKHAARRLHY DFRLELDGTL KSWAVPKGPS LDPADKRMAV HVEDHPLDYA 

       130        140        150        160        170        180 
GFEGVIPPGH YGAGTVIVWD RGIWVPDGDA DAAYRAGKLK FELRGEKLHG HWTLVRMHGS 

       190        200        210        220        230        240 
RQKEQDAWLL IKERDDAAVP ASEFDVTEAL PDSVLAGTSA ARKTTGRRAA TNATKPGNGA 

       250        260        270        280        290        300 
KDSTKDSART KPLPLPRRAT AAALPLALSP QLATLVERAP PDADAWRYEI KFDGYRMLAR 

       310        320        330        340        350        360 
IDGDDVRLFT RQGHDWTSRL KTLAREVRAL GLPDGWLDGE IVVLGKHGET DFQALQNAFE 

       370        380        390        400        410        420 
TSHVESIQYF VFDLPFYAGH DLRKAPLSER RALLRRLFEN NTGTRLRFSE EFEAAPDEML 

       430        440        450        460        470        480 
DAACRMKLEG VIGKRIDAPY VSTRSNTWIK LKCTQRQEFV IGGFTEPKGS RQGLGSLLLG 

       490        500        510        520        530        540 
VHDSAGRLRY AGNVGTGFDT RSLASLREQL DAQRTDKAPF HELPSSIKGL WVRPRLVAEV 

       550        560        570        580        590        600 
SFGSWTREGR VRHAVFHGLR SDKPASAVSV EKPAAPAGRK TAATTAARSA PATTRKGKPT 

       610        620        630        640        650        660 
AANGKVAISH SERVIDTASG LTKGDLVRYY ESAAPLMLPH LRGRPIAMVR APAGVAGQQF 

       670        680        690        700        710        720 
FQRHGDTLKI DGVNVLDPDL WPGHPALLEI VSEHALVAAA QLNVVEFHTW NANKRSMDRP 

       730        740        750        760        770        780 
NRIIFDLDPG EGVPWPHMRE AAALMKAWLD ELGLASFLKT SGGKGLHVVV PLTPRAGWDE 

       790        800        810        820        830        840 
VKEFAHGVVL HMAVTIPQRF VAKSGAGNRI GKIFIDYLRN GVGATTAAAF SARARPGLGV 

       850        860        870        880        890        900 
SVPLAWDELD GLEASDQWTV ANVAPRLDEL ARHDPWDTYA DTRQTITRAA TRLARAGRSK 


P 

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References

[1]"Complete sequence of chromosome 2 of Ralstonia eutropha JMP134."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Goltsman E., Martinez M., Schmutz J., Larimer F., Land M., Lykidis A., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JMP134 / LMG 1197.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000091 Genomic DNA. Translation: AAZ64427.1.
RefSeqYP_299271.1. NC_007348.1.

3D structure databases

ProteinModelPortalQ46R07.
SMRQ46R07. Positions 605-890.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING264198.Reut_B5079.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAZ64427; AAZ64427; Reut_B5079.
GeneID3613364.
KEGGreu:Reut_B5079.
PATRIC20236083. VBIRalEut24049_5843.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMANGLPDFQ.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycCPIN264198:GIW3-5156-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ46R07_CUPPJ
AccessionPrimary (citable) accession number: Q46R07
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)