Q46IT3 (RL17_PROMT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Synonyms:	rpl17
Ordered Locus Names:	PMN2A_1105

Organism

Prochlorococcus marinus (strain NATL2A) [Complete proteome] [HAMAP]

Taxonomic identifier

59920 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP MF_01368		PRO_1000055914

Sequences

	Sequence		Length	Mass (Da)
	Q46IT3 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 1E0E402D6946D35B	FASTA	116	13,348
	10 20 30 40 50 60 MRHQRRIPQL SLPADQRKAL LRGLTTQLIR EGRVTTTKAR AKALRNETER MITLAKDGSL 70 80 90 100 110 ASRRRAIGYV YDKQLVHALF EKAQERYGDR EGGYTRIVRT TPRRGDNSEM AIVELV

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NATL2A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000095 Genomic DNA. Translation: AAZ58595.1.
RefSeq	YP_292298.1. NC_007335.2.
3D structure databases
HSSP	HSSP built from PDB template 2CQM based on UniProtKB Q9NRX2.
ProteinModelPortal	Q46IT3.
SMR	Q46IT3. Positions 1-116.
ModBase	Search...
Protein-protein interaction databases
STRING	Q46IT3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3606493.
GenomeReviews	Gene locus PMN2A_1105 in contig CP000095_GR.
KEGG	pmn:PMN2A_1105.
PATRIC	23026089. VBIProMar14922_1970.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HBG704211.
OMA	FSELGPR.
PhylomeDB	Q46IT3.
ProtClustDB	PRK05591.
Enzyme and pathway databases
BioCyc	PMAR59920:PMN2A_1105-MONOMER.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_PROMT

Accession

Primary (citable) accession number: Q46IT3

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	September 13, 2005
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program