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Unreviewed, UniProtKB/TrEMBL Q46IF6 (Q46IF6_PROMT)

Last modified April 20, 2010. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
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Names and originHide

Protein namesSubmitted name:
TPR repeat EMBL AAZ58722.1
Gene names
Ordered Locus Names:PMN2A_1232
OrganismProchlorococcus marinus (strain NATL2A) [Complete proteome] [HAMAP]
Taxonomic identifier59920 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus
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Protein attributesHide

Sequence length750 AA.
Sequence statusComplete.
Protein existencePredicted.
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OntologiesHide

Keywords
   DomainRepeat RuleBase RU003537V0
TPR repeat RuleBase RU003339V0
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...
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SequencesHide

Sequence LengthMass (Da)Tools
Q46IF6-1 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: AA5E34650983A457

FASTA75086,189
        10         20         30         40         50         60 
MEQIFKQSQD KKKINEVKTF SVPFALEENK DNITIYTNTT SETSKQKIIN QAIKFHLQGN 

        70         80         90        100        110        120 
ILEAKKYYQY IIDQGFNDHR VFANYGAILR DLGKLKDAVL AVREAIKINP NFAEAYCNMG 

       130        140        150        160        170        180 
IIFKDLGNLQ DAEFYTRKAI QINPDSALAY SNLGIILKDL GNLQDAEFYT RKAIQINPNL 

       190        200        210        220        230        240 
PEAYSNLGII LKDLGNLQDA EFSYRKAIQI NPNLPEAYFN LGIILKDLGN LQDAEFSYRK 

       250        260        270        280        290        300 
AIQIKPKLAN SHNNLGIILK DLGKLQDAEL SYRKAIQINP DYAEAYSNLG STLKEQGNFT 

       310        320        330        340        350        360 
DAINQFKHAL KLNNELTSAK AGLMSTKGNI CDWSDERTRN IWLKSLGIKG KAINPWGLLS 

       370        380        390        400        410        420 
LENNPLNHLK RSKKFYKEKY IRPTQYIKPS PKSLIHIGYF SADFLNHPVM QLIAPLLELH 

       430        440        450        460        470        480 
DKYRFKIYLY SFVPKEDEYT ERAKKSGCIF RNIKNLNDIE AVELARSDQL DIAVDLMGYT 

       490        500        510        520        530        540 
RHNRMPIFSY RVAPIQINYL GYNGSIGSDT IDYIIADKIT IPREYEKFYS EKVIRLPNCF 

       550        560        570        580        590        600 
ICDDHKKEIS KESISRKDFN LPDQGFIFTC FNNNYKITEK EFNIWMNLLR KIEGSVLWLY 

       610        620        630        640        650        660 
KANQWSMNNL YKEASKRKVD RDRIIFSEKL PMSKHLARHS LGDLALDTFN YNGGVTSSNA 

       670        680        690        700        710        720 
LWTGLPVLTK IGQNFTARMS ASLLTSLGLP ELITYSESEY EDKALYIASN SEEIIRLKSK 

       730        740        750 
LNKSKETSPL FNSKLFTQDL ENIYLDLVKK

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ReferencesHide

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
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Cross-referencesHide

Sequence databases

EMBL
GenBank
DDBJ		CP000095 Genomic DNA. Translation: AAZ58722.1.
RefSeqYP_292425.1.

3D structure databases

SMRQ46IF6. Positions 51-315.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ46IF6.

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Genome annotation databases

GeneID3606625.
GenomeReviewsGene locus PMN2A_1232 in contig CP000095_GR.
KEGGpmn:PMN2A_1232.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3914.
HOGENOMHBG684498.
OMAINPNLPE.
ProtClustDBCLSK716001.

Enzyme and pathway databases

BioCycPMAR59920:PMN2A_1232-MONOMER.

Family and domain databases

InterProIPR001440. TPR-1.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 1 hit.
PfamPF00515. TPR_1. 6 hits.
[Graphical view]
SMARTSM00028. TPR. 7 hits.
[Graphical view]
PROSITEPS50005. TPR. 7 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...
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Entry informationHide

Entry nameQ46IF6_PROMT
AccessionPrimary (citable) accession number: Q46IF6
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 20, 2010
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information