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Q46IF5 (Q46IF5_PROMT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
TPR repeat EMBL AAZ58723.1
Gene names
Ordered Locus Names:PMN2A_1233
OrganismProchlorococcus marinus (strain NATL2A) [Complete proteome] [HAMAP] EMBL AAZ58723.1
Taxonomic identifier59920 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length909 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainRepeat RuleBase RU003537
TPR repeat RuleBase RU003339
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionbinding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q46IF5 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 3AC395730BF03F5D

FASTA909103,776
        10         20         30         40         50         60 
MTEERKNQKQ EGSKVKTFPV SFALGEIKEN ITITTNSASN TSKEQKRFGD QSKTIKKKDT 

        70         80         90        100        110        120 
NTITKPSKDQ IINQAFKFHS QGNIKEAAKN YQYFINQGFS DHMVFSNYGA ILRDLGNLQD 

       130        140        150        160        170        180 
AELYTRKAIK INPNYALAYS NLGNVLKDLG KSQDAELSYR KAIQINPNYA DAHYNLGIIL 

       190        200        210        220        230        240 
KELGNLQDAE LSYRKAIQIN PNYADAYSNL GNVLKDLDNL QDAELSYRKA IQINPSYADA 

       250        260        270        280        290        300 
YSNLGNVLKD LGNLQDAELS YRKAIQINPD YAEAHFNLGN LLKDLGKLQD AELSYRKAIQ 

       310        320        330        340        350        360 
IKSDYAEAHY NLGIILKDLG NLQDAEFYNR KAIQIKPDYA EAHFNLGIIL KDLGNLQDAE 

       370        380        390        400        410        420 
FSYRQAIQIK PDYADAYSNL GNVLKDLGKL KDAELSYRKA IQIKPDYAEV YSNLGNVLKD 

       430        440        450        460        470        480 
LGNLQDAEFS YRKAIQIKPD YADAYSNLGN ILKELSNFTD AINQFKDALK LNNELTSAQT 

       490        500        510        520        530        540 
GLMSTQGNIC DWSDEETHNK WLKSLGIKGK AINPWGLLSL EDNPLNHLKR SKKFYKEKYV 

       550        560        570        580        590        600 
RATQYIKPSP KSLIHIGYFS ADFRTHPVMQ LIAPLLELHD KYRFKIYLYS FAPKEDEYTE 

       610        620        630        640        650        660 
RAKKSGCIFR NIKNLNDIEA VELARSDQLD IAVDLMGYTR HNRMPIFSYR VAPIQINYLG 

       670        680        690        700        710        720 
YIGSIGSDTI DYIIADKITI PREYEKFYSE KVIRMPNCFI CDDHKKEITK ESISRKDFNL 

       730        740        750        760        770        780 
PDQGFIFTCF NNNYKITKKE FNIWMNLLRK VEGSVLWLYK SNQLSMNNLY KEASKRKIDR 

       790        800        810        820        830        840 
DRIIFAEKLP MSKHLARHSL GDLALDTFNC NGGKTTCDAL LAGLPLLTKI GQSFTARMSA 

       850        860        870        880        890        900 
SLLTSLGLPE LITYSESEYE DKALYIASNS EEIIRLKSKL NKSKETSPLF NSKLFTQDLE 


NIYLDLVKK

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References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000095 Genomic DNA. Translation: AAZ58723.1.
RefSeqYP_292426.1. NC_007335.2.

3D structure databases

ProteinModelPortalQ46IF5.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ46IF5.

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3606626.
GenomeReviewsGene locus PMN2A_1233 in contig CP000095_GR.
KEGGpmn:PMN2A_1233.
PATRIC23026359. VBIProMar14922_2102.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3914.
HOGENOMHBG684498.
OMAFACFNNN.
PhylomeDBQ46IF5.
ProtClustDBCLSK716001.

Enzyme and pathway databases

BioCycPMAR59920:PMN2A_1233-MONOMER.

Family and domain databases

InterProIPR001440. TPR-1.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 4 hits.
PfamPF00515. TPR_1. 10 hits.
[Graphical view]
SMARTSM00028. TPR. 11 hits.
[Graphical view]
PROSITEPS50005. TPR. 11 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ46IF5_PROMT
AccessionPrimary (citable) accession number: Q46IF5
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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