Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

TPR repeat

Gene

PMN2A_1233

Organism
Prochlorococcus marinus (strain NATL2A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciPMAR59920:GI1O-2126-MONOMER.

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Names & Taxonomyi

Protein namesi
Submitted name:
TPR repeatImported
Gene namesi
Ordered Locus Names:PMN2A_1233Imported
OrganismiProchlorococcus marinus (strain NATL2A)Imported
Taxonomic identifieri59920 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
Proteomesi
  • UP000002535 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ46IF5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini68 – 475408TPR_REGIONInterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000003764.
OMAiGDILWAK.
OrthoDBiPOG091H0DAB.
PhylomeDBiQ46IF5.

Family and domain databases

Gene3Di1.25.40.10. 4 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 3 hits.
PF13414. TPR_11. 3 hits.
PF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 11 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q46IF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEERKNQKQ EGSKVKTFPV SFALGEIKEN ITITTNSASN TSKEQKRFGD
60 70 80 90 100
QSKTIKKKDT NTITKPSKDQ IINQAFKFHS QGNIKEAAKN YQYFINQGFS
110 120 130 140 150
DHMVFSNYGA ILRDLGNLQD AELYTRKAIK INPNYALAYS NLGNVLKDLG
160 170 180 190 200
KSQDAELSYR KAIQINPNYA DAHYNLGIIL KELGNLQDAE LSYRKAIQIN
210 220 230 240 250
PNYADAYSNL GNVLKDLDNL QDAELSYRKA IQINPSYADA YSNLGNVLKD
260 270 280 290 300
LGNLQDAELS YRKAIQINPD YAEAHFNLGN LLKDLGKLQD AELSYRKAIQ
310 320 330 340 350
IKSDYAEAHY NLGIILKDLG NLQDAEFYNR KAIQIKPDYA EAHFNLGIIL
360 370 380 390 400
KDLGNLQDAE FSYRQAIQIK PDYADAYSNL GNVLKDLGKL KDAELSYRKA
410 420 430 440 450
IQIKPDYAEV YSNLGNVLKD LGNLQDAEFS YRKAIQIKPD YADAYSNLGN
460 470 480 490 500
ILKELSNFTD AINQFKDALK LNNELTSAQT GLMSTQGNIC DWSDEETHNK
510 520 530 540 550
WLKSLGIKGK AINPWGLLSL EDNPLNHLKR SKKFYKEKYV RATQYIKPSP
560 570 580 590 600
KSLIHIGYFS ADFRTHPVMQ LIAPLLELHD KYRFKIYLYS FAPKEDEYTE
610 620 630 640 650
RAKKSGCIFR NIKNLNDIEA VELARSDQLD IAVDLMGYTR HNRMPIFSYR
660 670 680 690 700
VAPIQINYLG YIGSIGSDTI DYIIADKITI PREYEKFYSE KVIRMPNCFI
710 720 730 740 750
CDDHKKEITK ESISRKDFNL PDQGFIFTCF NNNYKITKKE FNIWMNLLRK
760 770 780 790 800
VEGSVLWLYK SNQLSMNNLY KEASKRKIDR DRIIFAEKLP MSKHLARHSL
810 820 830 840 850
GDLALDTFNC NGGKTTCDAL LAGLPLLTKI GQSFTARMSA SLLTSLGLPE
860 870 880 890 900
LITYSESEYE DKALYIASNS EEIIRLKSKL NKSKETSPLF NSKLFTQDLE

NIYLDLVKK
Length:909
Mass (Da):103,776
Last modified:September 13, 2005 - v1
Checksum:i3AC395730BF03F5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000095 Genomic DNA. Translation: AAZ58723.1.
RefSeqiWP_011295577.1. NC_007335.2.

Genome annotation databases

EnsemblBacteriaiAAZ58723; AAZ58723; PMN2A_1233.
KEGGipmn:PMN2A_1233.
PATRICi23026359. VBIProMar14922_2102.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000095 Genomic DNA. Translation: AAZ58723.1.
RefSeqiWP_011295577.1. NC_007335.2.

3D structure databases

ProteinModelPortaliQ46IF5.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT41. Glycosyltransferase Family 41.

Protocols and materials databases

DNASUi3606626.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ58723; AAZ58723; PMN2A_1233.
KEGGipmn:PMN2A_1233.
PATRICi23026359. VBIProMar14922_2102.

Phylogenomic databases

HOGENOMiHOG000003764.
OMAiGDILWAK.
OrthoDBiPOG091H0DAB.
PhylomeDBiQ46IF5.

Enzyme and pathway databases

BioCyciPMAR59920:GI1O-2126-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 4 hits.
InterProiIPR029489. OGT/SEC/SPY_C.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13844. Glyco_transf_41. 2 hits.
PF00515. TPR_1. 3 hits.
PF13414. TPR_11. 3 hits.
PF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00028. TPR. 11 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 11 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ46IF5_PROMT
AccessioniPrimary (citable) accession number: Q46IF5
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: September 7, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.