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Protein

30S ribosomal protein S24e

Gene

rps24e

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-290-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S24eUniRule annotation
Gene namesi
Name:rps24eUniRule annotation
Ordered Locus Names:Mbar_A0282
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10110130S ribosomal protein S24ePRO_1000017739Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A0282.

Structurei

3D structure databases

ProteinModelPortaliQ46FS6.
SMRiQ46FS6. Positions 1-101.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S24e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04182. Archaea.
COG2004. LUCA.
HOGENOMiHOG000223076.
KOiK02974.
OMAiLHRTDVT.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
[Graphical view]
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiPF01282. Ribosomal_S24e. 1 hit.
[Graphical view]
ProDomiPD006052. Ribosomal_S24e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46FS6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIRILKDKN NALLNRRELD FIVKYEGSTP SRNDVRNKLA AMLNAPLELV
60 70 80 90 100
VVQRLKTEYG MQEGKGYAKI YENADRMKDV ELEYVLKRNV APGMETEGEE

A
Length:101
Mass (Da):11,619
Last modified:September 13, 2005 - v1
Checksum:i14E8DFD89F55E1FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69266.1.
RefSeqiWP_011305321.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ69266; AAZ69266; Mbar_A0282.
GeneIDi3624402.
KEGGimba:Mbar_A0282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69266.1.
RefSeqiWP_011305321.1. NC_007355.1.

3D structure databases

ProteinModelPortaliQ46FS6.
SMRiQ46FS6. Positions 1-101.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A0282.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ69266; AAZ69266; Mbar_A0282.
GeneIDi3624402.
KEGGimba:Mbar_A0282.

Phylogenomic databases

eggNOGiarCOG04182. Archaea.
COG2004. LUCA.
HOGENOMiHOG000223076.
KOiK02974.
OMAiLHRTDVT.

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-290-MONOMER.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_00545. Ribosomal_S24e. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001976. Ribosomal_S24e.
[Graphical view]
PANTHERiPTHR10496. PTHR10496. 1 hit.
PfamiPF01282. Ribosomal_S24e. 1 hit.
[Graphical view]
ProDomiPD006052. Ribosomal_S24e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54189. SSF54189. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS24_METBF
AccessioniPrimary (citable) accession number: Q46FS6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: September 13, 2005
Last modified: November 11, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.