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Protein

UPF0292 protein Mbar_A0484

Gene

Mbar_A0484

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Mg2+UniRule annotationNote: Binds two Mg2+ per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi34Magnesium 1; catalyticUniRule annotation1
Metal bindingi78Magnesium 1; catalyticUniRule annotation1
Metal bindingi78Magnesium 2UniRule annotation1
Metal bindingi80Magnesium 2UniRule annotation1

GO - Molecular functioni

Keywordsi

LigandMagnesium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0292 protein Mbar_A0484UniRule annotation
Gene namesi
Ordered Locus Names:Mbar_A0484
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000649381 – 143UPF0292 protein Mbar_A0484Add BLAST143

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A0484.

Structurei

3D structure databases

ProteinModelPortaliQ46F76.
SMRiQ46F76.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 109ToprimUniRule annotationAdd BLAST82

Sequence similaritiesi

Belongs to the UPF0292 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01486. Archaea.
COG1658. LUCA.
HOGENOMiHOG000230374.
OMAiMILTDFD.
OrthoDBiPOG093Z0EJS.

Family and domain databases

CDDicd01027. TOPRIM_RNase_M5_like. 1 hit.
HAMAPiMF_01095. UPF0292. 1 hit.
InterProiView protein in InterPro
IPR006171. TOPRIM_domain.
IPR034141. TOPRIM_RNase_M5-like.
IPR022972. UPF0292.
PfamiView protein in Pfam
PF13662. Toprim_4. 1 hit.
SMARTiView protein in SMART
SM00493. TOPRIM. 1 hit.
PROSITEiView protein in PROSITE
PS50880. TOPRIM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46F76-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLEIYRKR LERIEELLSE LSEYSGRGAI IIVEGKRDVL SLKRLGIEGN
60 70 80 90 100
FELATHQSLF NFSEKIARLG NEVVILTDWD RRGDILAIKL SGYFQSFGLK
110 120 130 140
PELEIRNKLR LISQKEIKDV ESLYTYVSKL RLKTGYCSKR DFQ
Length:143
Mass (Da):16,662
Last modified:September 13, 2005 - v1
Checksum:i583F6AD85449B54F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69466.1.
RefSeqiWP_011305518.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ69466; AAZ69466; Mbar_A0484.
GeneIDi3624226.
KEGGimba:Mbar_A0484.

Similar proteinsi

Entry informationi

Entry nameiY484_METBF
AccessioniPrimary (citable) accession number: Q46F76
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: September 13, 2005
Last modified: September 27, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries