Q46F23 (Q46F23_METBF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL AAZ69519.1

Gene names

Ordered Locus Names:

Mbar_A0538

Organism

Methanosarcina barkeri (strain Fusaro / DSM 804) [Complete proteome] [HAMAP] EMBL AAZ69519.1

Taxonomic identifier

269797 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina

Protein attributes

Sequence length	398 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q46F23 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: C7BFA1FA48DE7487	FASTA	398	46,589
	10 20 30 40 50 60 MTSVCMYFQA HQPFRLRRFW PDDRSGFFRY FDERSNREIF ERVARKCYIP TNKLLLDALD 70 80 90 100 110 120 EHKGEFRFSL SVTGTLLEQC ELWGKDALEG FRQMAETGAV EFLDETFYHS LSSLFEDKTE 130 140 150 160 170 180 FIEEIKEHRE IMFDLLGVKP QVFRNTELLY NNTIAKLVSD LGYRAILTEG ADHMLEGRSP 190 200 210 220 230 240 NVLYRAKGSG LPIIFRNYKL SDDIGYRFSA GWWEGYPLTA KKWALWASGN NEDCVNIFMD 250 260 270 280 290 300 YETFGEHQWE ETGIFSFLKE LPGEVLKTHL DFSTPSELVD KYTPVADIDV GDFSTISWAD 310 320 330 340 350 360 MERDTSAWLG NDMQRRCFEE IKLLEPFVRK TEDPEILRIW KHLLTSDHYY YMCTKWLGDG 370 380 390 DVHSYFSVHS TPFDAAVNFM AVLMDFKAQV FRKLSTIA

References

[1]

"The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes." Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S., Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R. J. Bacteriol. 188:7922-7931(2006) [PubMed: 16980466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000099 Genomic DNA. Translation: AAZ69519.1.
RefSeq	YP_304099.1. NC_007355.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q46F23.
Protein family/group databases
CAZy	GH57. Glycoside Hydrolase Family 57.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3627097.
GenomeReviews	Gene locus Mbar_A0538 in contig CP000099_GR.
KEGG	mba:Mbar_A0538.
NMPDR	fig|269797.3.peg.715.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG05508.
HOGENOM	HBG392047.
OMA	MDYETFG.
ProtClustDB	CLSK450515.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR004300. Glyco_hydro_57_N. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
KO	K07405.
Pfam	PF03065. Glyco_hydro_57. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q46F23_METBF

Accession

Primary (citable) accession number: Q46F23

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	November 16, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)