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Protein

UPF0219 protein Mbar_A0551

Gene

Mbar_A0551

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-562-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0219 protein Mbar_A0551UniRule annotation
Gene namesi
Ordered Locus Names:Mbar_A0551
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 349349UPF0219 protein Mbar_A0551PRO_1000068439Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A0551.

Structurei

3D structure databases

ProteinModelPortaliQ46F10.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0219 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01767. Archaea.
COG3425. LUCA.
HOGENOMiHOG000223205.
KOiK01641.
OMAiIVTYGSY.

Family and domain databases

Gene3Di3.40.47.10. 2 hits.
HAMAPiMF_01409. UPF0219. 1 hit.
InterProiIPR013747. ACP_syn_III_C.
IPR004656. FabH-rel.
IPR013528. HMG_CoA_synth_N.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF08541. ACP_syn_III_C. 1 hit.
PF01154. HMG_CoA_synt_N. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 2 hits.
TIGRFAMsiTIGR00748. HMG_CoA_syn_Arc. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46F10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIGIVSYGA YVPRYRIKVE EIARVWGDDA NALKSGLMVY EKSVPDIDED
60 70 80 90 100
AATIAVEAAR YAMTRSGVDP ERIGAVYTGS ESHPYAVKPT STIVSQAIGA
110 120 130 140 150
TPNMTAADFE FACKAGTAAV QACMGLVSSG MIDLGMAIGA DVSQGAPGDA
160 170 180 190 200
LEYTAAAGGV ACLIGKKESE LAAIIEDTYS FTTDTPDFWR REGMPYPEHG
210 220 230 240 250
GRFTGEPGYF KHVTNGAKGL LNKLGTKPED YDYAVFHQPN GKFPTKAAKT
260 270 280 290 300
LGFTKAQIAP GLVVPKIGNT YSGSCLMGIA ATLDQAKPGD RIFATAFGSG
310 320 330 340
AGSDAFSITV TDRIEEIRNR APTVSELIKD PIYIDYARYA KHKGKIRRS
Length:349
Mass (Da):37,113
Last modified:September 13, 2005 - v1
Checksum:iFB92E0D552277C71
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69532.1.
RefSeqiWP_011305583.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ69532; AAZ69532; Mbar_A0551.
GeneIDi3626337.
KEGGimba:Mbar_A0551.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69532.1.
RefSeqiWP_011305583.1. NC_007355.1.

3D structure databases

ProteinModelPortaliQ46F10.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A0551.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ69532; AAZ69532; Mbar_A0551.
GeneIDi3626337.
KEGGimba:Mbar_A0551.

Phylogenomic databases

eggNOGiarCOG01767. Archaea.
COG3425. LUCA.
HOGENOMiHOG000223205.
KOiK01641.
OMAiIVTYGSY.

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-562-MONOMER.

Family and domain databases

Gene3Di3.40.47.10. 2 hits.
HAMAPiMF_01409. UPF0219. 1 hit.
InterProiIPR013747. ACP_syn_III_C.
IPR004656. FabH-rel.
IPR013528. HMG_CoA_synth_N.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF08541. ACP_syn_III_C. 1 hit.
PF01154. HMG_CoA_synt_N. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 2 hits.
TIGRFAMsiTIGR00748. HMG_CoA_syn_Arc. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY551_METBF
AccessioniPrimary (citable) accession number: Q46F10
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: September 13, 2005
Last modified: May 11, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.