Mbar_A0970

Functionⁱ

Enzyme and pathway databases

BioCycⁱ	MBAR269797:GHUW-973-MONOMER.

BioCycⁱ

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Uncharacterized proteinImported
Gene namesⁱ	Ordered Locus Names:Mbar_A0970Imported
Organismⁱ	Methanosarcina barkeri (strain Fusaro / DSM 804)Imported
Taxonomic identifierⁱ	269797 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina › Methanosarcina barkeri
Proteomesⁱ	UP000008156 Componentⁱ: Chromosome

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	269797.Mbar_A0970.

STRINGⁱ

269797.Mbar_A0970.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q46DV0.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	98 – 246	RNA_ligaseInterPro annotationAdd BLAST		149

Phylogenomic databases

eggNOGⁱ	arCOG04218. Archaea. COG1423. LUCA.
HOGENOMⁱ	HOG000224394.
KEGG Orthology (KO) More...KOⁱ	K07468.
OMAⁱ	EEKMNGY.
Database of Orthologous Groups More...OrthoDBⁱ	POG093Z048P.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd07894. Adenylation_RNA_ligase. 1 hit.
InterProⁱ	View protein in InterPro IPR021122. RNA_ligase_dom_REL/Rnl2. IPR001072. RNA_ligase_Pab1020.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF09414. RNA_ligase. 1 hit.
PRINTSⁱ	PR01048. Y414FAMILY.
TIGRFAMsⁱ	TIGR01209. TIGR01209. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Q46DV0-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MSREGNEEID PQFIARLASF LGFNKERVQH LFEKNYLAQN WGKYEYLFRF 
        60         70         80         90        100
DKEISHIERG TVLYEKDGSF EIIMGFPKIR RAMVLDPTIK KHFNGLEKVA 
       110        120        130        140        150
VEEKMNGYNV RIAIAKDEIL AITRSGYICP YTTQKAKEKL NLKFFDDFPE 
       160        170        180        190        200
LVLYGEMIGP DNPYVPKDIY DIESVEFYIF DIREKNSGKP LPIKRKHEIL 
       210        220        230        240        250
EKYGFFQVKF FKEIPLETAA EEIGKIIREL GEKEHEGVVI KDPEMVLSPL 
       260        270        280        290        300
KYTSSQSNCS DLRHAFKFYN ETGRDYMLSR IVREGFQTVE WNEDKDEFEK 
       310        320        330        340        350
RCMQLGKSIL GPLSESILSV KNGQRLYEEA KIRVRDLKTA AEFEDYLKRL 
       360        370        380        390
GIDAIFEEPQ LVGGEYLVII KKINKSTNDK TQAIWQGEPW

Length:390

Mass (Da):45,618

Last modified:September 13, 2005 - v1

Checksum:ⁱ92D35FC1DF76EB66

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000099 Genomic DNA. Translation: AAZ69942.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011305991.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaⁱ	AAZ69942; AAZ69942; Mbar_A0970.
GeneIDⁱ	3625742.
KEGGⁱ	mba:Mbar_A0970.

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
Q46DV0	A0A0E3LKC5	Methanosarcina barkeri str. Wiesmoor	390	UniRef100_A0A0E3LKC5	Cluster: RNA ligase, family	2

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
Q46DV0	A0A0E3SH80 A0A1D2X0M0 A0A0E3QRR8 A0A0G3C573 A0A0E3QXX9 A0A0E3LKC5 A0A2A2HMQ4 A0A0E3PZY0 A0A0E3Q9W7	Methanosarcina barkeri 3 Methanosarcina sp. A14 Methanosarcina barkeri MS Methanosarcina barkeri CM1 Methanosarcina barkeri 227 Methanosarcina barkeri str. Wiesmoor Methanosarcina spelaei Methanosarcina vacuolata Z-761 Methanosarcina sp. Kolksee	390	UniRef90_A0A0E3SH80	Cluster: RNA ligase, family	10

Protein	Similar proteins	Organisms	Length	Cluster ID	Cluster name	Size
Q46DV0	A0A0E3KW11 A0A0E3NH75 A0A0E3RYJ1 A0A0E3P0D2 A0A0E3LBZ0 A0A0E3P9M9 Q8TH69 L0KYN0 UPI000B91727E A0A0E3PZY0 +45	Methanosarcina sp. WH1 Methanosarcina sp. WWM596 Methanosarcina lacustris Z-7289 Methanosarcina siciliae T4/M Methanosarcina siciliae C2J Methanosarcina siciliae HI350 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) Methanolobus sp. YSF-03 Methanosarcina vacuolata Z-761 And more	390	UniRef50_A0A0E3KW11	Cluster: RNA ligase, family	56

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000099 Genomic DNA. Translation: AAZ69942.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011305991.1. NC_007355.1.

3D structure databases

ProteinModelPortalⁱ	Q46DV0.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	269797.Mbar_A0970.

STRINGⁱ

269797.Mbar_A0970.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	AAZ69942; AAZ69942; Mbar_A0970.
GeneIDⁱ	3625742.
KEGGⁱ	mba:Mbar_A0970.

Phylogenomic databases

eggNOGⁱ	arCOG04218. Archaea. COG1423. LUCA.
HOGENOMⁱ	HOG000224394.
KEGG Orthology (KO) More...KOⁱ	K07468.
OMAⁱ	EEKMNGY.
Database of Orthologous Groups More...OrthoDBⁱ	POG093Z048P.

Enzyme and pathway databases

BioCycⁱ	MBAR269797:GHUW-973-MONOMER.

BioCycⁱ

MBAR269797:GHUW-973-MONOMER.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd07894. Adenylation_RNA_ligase. 1 hit.
InterProⁱ	View protein in InterPro IPR021122. RNA_ligase_dom_REL/Rnl2. IPR001072. RNA_ligase_Pab1020.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF09414. RNA_ligase. 1 hit.
PRINTSⁱ	PR01048. Y414FAMILY.
TIGRFAMsⁱ	TIGR01209. TIGR01209. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	Q46DV0_METBF
Accessionⁱ	Q46DV0Primary (citable) accession number: Q46DV0
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	September 13, 2005
	Last sequence update:	September 13, 2005
	Last modified:	March 28, 2018
	This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - Q46DV0 (Q46DV0_METBF)

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Uncharacterized protein

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Functionⁱ

Enzyme and pathway databases

Names & Taxonomyⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q46DV0 (Q46DV0_METBF)

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Uncharacterized protein

Mbar_A0970

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

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3D structure databases

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Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

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Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

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Functionⁱ

Names & Taxonomyⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ