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Protein
Submitted name:

Uncharacterized protein

Gene

Mbar_A0970

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-992-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Mbar_A0970Imported
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)Imported
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
ProteomesiUP000008156 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A0970.

Structurei

3D structure databases

ProteinModelPortaliQ46DV0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46DV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSREGNEEID PQFIARLASF LGFNKERVQH LFEKNYLAQN WGKYEYLFRF
60 70 80 90 100
DKEISHIERG TVLYEKDGSF EIIMGFPKIR RAMVLDPTIK KHFNGLEKVA
110 120 130 140 150
VEEKMNGYNV RIAIAKDEIL AITRSGYICP YTTQKAKEKL NLKFFDDFPE
160 170 180 190 200
LVLYGEMIGP DNPYVPKDIY DIESVEFYIF DIREKNSGKP LPIKRKHEIL
210 220 230 240 250
EKYGFFQVKF FKEIPLETAA EEIGKIIREL GEKEHEGVVI KDPEMVLSPL
260 270 280 290 300
KYTSSQSNCS DLRHAFKFYN ETGRDYMLSR IVREGFQTVE WNEDKDEFEK
310 320 330 340 350
RCMQLGKSIL GPLSESILSV KNGQRLYEEA KIRVRDLKTA AEFEDYLKRL
360 370 380 390
GIDAIFEEPQ LVGGEYLVII KKINKSTNDK TQAIWQGEPW
Length:390
Mass (Da):45,618
Last modified:September 13, 2005 - v1
Checksum:i92D35FC1DF76EB66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69942.1.
RefSeqiYP_304522.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ69942; AAZ69942; Mbar_A0970.
GeneIDi3625742.
KEGGimba:Mbar_A0970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ69942.1.
RefSeqiYP_304522.1. NC_007355.1.

3D structure databases

ProteinModelPortaliQ46DV0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A0970.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ69942; AAZ69942; Mbar_A0970.
GeneIDi3625742.
KEGGimba:Mbar_A0970.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-992-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes."
    Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S., Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R.
    J. Bacteriol. 188:7922-7931(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Fusaro / DSM 804Imported.

Entry informationi

Entry nameiQ46DV0_METBF
AccessioniPrimary (citable) accession number: Q46DV0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2005
Last sequence update: September 13, 2005
Last modified: April 29, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.