Q469N7 (Q469N7_METBF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pyruvoyl-dependent arginine decarboxylase 2 HAMAP MF_01404
Short name=PvlArgDC 2 HAMAP MF_01404
EC=4.1.1.19 HAMAP MF_01404

Gene names

Name:	pdaD2 HAMAP MF_01404
Ordered Locus Names:	Mbar_A2492

Organism

Methanosarcina barkeri (strain Fusaro / DSM 804) [Complete proteome] [HAMAP] EMBL AAZ71405.1

Taxonomic identifier

269797 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina

Protein attributes

Sequence length	181 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-arginine = agmatine + CO2. HAMAP MF_01404
Cofactor	Pyruvoyl group By similarity. HAMAP MF_01404
Sequence similarities	Belongs to the pdaD family. HAMAP MF_01404

Ontologies

Keywords
Ligand	Pyruvate HAMAP MF_01404
Molecular function	Decarboxylase HAMAP MF_01404 Lyase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arginine decarboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Site	40 – 41	2	Cleavage (non-hydrolytic) By similarity HAMAP MF_01404
Amino acid modifications
	Modified residue	41	1	Pyruvic acid (Ser) By similarity HAMAP MF_01404

Sequences

	Sequence		Length	Mass (Da)
	Q469N7 [UniParc]. Last modified September 13, 2005. Version 1. Checksum: 31C04ADD3328156C	FASTA	181	19,915
	10 20 30 40 50 60 MIPRKAFLTK GTGVHKDRLA SFELALRAAK IEKFNLVSVS SILPPNCKVV PREEGLSELK 70 80 90 100 110 120 PGAIVHCVLA RNDTNEPHRL MAAAIGTAVP VNEDNYGYIS EHHSFGEEEI IAGEYAEDLA 130 140 150 160 170 180 ATMLATTLGI EFNAEMAWHE REQVYKASGH IFDTFHMCQT ANGDKDGKWT TVVAAMVFIT I

References

[1]

"The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes." Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S., Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R. J. Bacteriol. 188:7922-7931(2006) [PubMed: 16980466] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000099 Genomic DNA. Translation: AAZ71405.1.
RefSeq	YP_305985.1. NC_007355.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q469N7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3625685.
GenomeReviews	Gene locus Mbar_A2492 in contig CP000099_GR.
KEGG	mba:Mbar_A2492.
NMPDR	fig|269797.3.peg.2880.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG07911.
HOGENOM	HBG539680.
OMA	YKMSGKI.
ProtClustDB	PRK01285.
Family and domain databases
HAMAP	MF_01404. PvlArgDC. [Tree]
InterPro	IPR016104. Pyr-dep_his/arg-deCO2ase. IPR016105. Pyr-dep_his/arg-deCO2ase_sand. IPR002724. Pyruvoyl-dep_arg_deCO2ase. [Graphical view]
Gene3D	G3DSA:3.50.20.10. Pyr-dep_his/arg-deCO2ase_sand. 1 hit.
KO	K02626.
Pfam	PF01862. PvlArgDC. 1 hit. [Graphical view]
PIRSF	PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
ProDom	PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF56271. His_carbxylase. 1 hit.
TIGRFAMs	TIGR00286. TIGR00286. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q469N7_METBF

Accession

Primary (citable) accession number: Q469N7

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2005
Last sequence update:	September 13, 2005
Last modified:	November 16, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)