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Protein

Ribonuclease P protein component 2

Gene

rnp2

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-2551-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 2UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 2UniRule annotation
Alternative name(s):
Pop5UniRule annotation
Gene namesi
Name:rnp2UniRule annotation
Ordered Locus Names:Mbar_A2502
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 135135Ribonuclease P protein component 2PRO_1000046621Add
BLAST

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi269797.Mbar_A2502.

Structurei

3D structure databases

ProteinModelPortaliQ469M7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 2 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01365. Archaea.
COG1369. LUCA.
HOGENOMiHOG000286243.
KOiK03537.
OMAiFEVACES.

Family and domain databases

HAMAPiMF_00755. RNase_P_2. 1 hit.
InterProiIPR002759. RNase_P/MRP_subunit.
IPR016434. RNase_P_comp-2.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFiPIRSF004952. RNase_P_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q469M7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLLPSLRA KKRYLAFELI SEVPVSRSDL VKEVMFSASS LLGDVTASEC
60 70 80 90 100
DIKVLGFEES KGIIQCAHTK VKETRASMAT LTRINGKRAT VHILGTSGTI
110 120 130
KRATEKFLQN TAFEPEIRIN PKRLKNNNLS RVQES
Length:135
Mass (Da):15,090
Last modified:September 13, 2005 - v1
Checksum:iF37C061D863401ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ71415.1.
RefSeqiWP_011307460.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ71415; AAZ71415; Mbar_A2502.
GeneIDi3625695.
KEGGimba:Mbar_A2502.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ71415.1.
RefSeqiWP_011307460.1. NC_007355.1.

3D structure databases

ProteinModelPortaliQ469M7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A2502.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ71415; AAZ71415; Mbar_A2502.
GeneIDi3625695.
KEGGimba:Mbar_A2502.

Phylogenomic databases

eggNOGiarCOG01365. Archaea.
COG1369. LUCA.
HOGENOMiHOG000286243.
KOiK03537.
OMAiFEVACES.

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-2551-MONOMER.

Family and domain databases

HAMAPiMF_00755. RNase_P_2. 1 hit.
InterProiIPR002759. RNase_P/MRP_subunit.
IPR016434. RNase_P_comp-2.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFiPIRSF004952. RNase_P_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRNP2_METBF
AccessioniPrimary (citable) accession number: Q469M7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: September 13, 2005
Last modified: December 9, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.